Difference between revisions of "RXN-7659"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12581 RXN-12581] == * direction: ** left-to-right * common-name: ** all-trans-retinol dehydroge...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed-MG+2 ExchangeSeed-MG+2] == * direction: ** reversible == Reaction formula == * 1.0 M...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12581 RXN-12581] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed-MG+2 ExchangeSeed-MG+2] ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** all-trans-retinol dehydrogenase
 
** retinol dehydrogenase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.1.1.105 ec-1.1.1.105]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CRPB-all-trans-Retinol]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CRPB-all-trans-Retinal]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1.0 [[MG+2]][C-BOUNDARY] '''<=>''' 1.0 [[MG+2]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* Gene: [[SJ21322]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ20291]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ21312]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ10028]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ12574]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ05274]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ05277]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ02723]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ19151]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ05275]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ05276]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6872]], retinoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6872 PWY-6872]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[unknown-tool]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=48489 48489]
+
{{#set: nb gene associated=0}}
{{#set: direction=left-to-right}}
+
{{#set: nb pathway associated=0}}
{{#set: common-name=retinol dehydrogenase|all-trans-retinol dehydrogenase}}
+
{{#set: reconstruction category=manual}}
{{#set: ec-number=ec-1.1.1.105}}
+
{{#set: reconstruction tool=unknown-tool}}
{{#set: nb gene associated=11}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction source=import_from_medium}}
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 14:28, 26 August 2019

Reaction ExchangeSeed-MG+2

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links