Difference between revisions of "3.2.1.109-RXN"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-DEHYDROPANTOATE-REDUCT-RXN 2-DEHYDROPANTOATE-REDUCT-RXN] == * direction: ** left-to-right * ec-nu...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AICARTRANSFORM-RXN AICARTRANSFORM-RXN] == * direction: ** reversible * common-name: ** aicar transf...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AICARTRANSFORM-RXN AICARTRANSFORM-RXN] == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
+ | * common-name: | ||
+ | ** aicar transformylase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.1.2.3 ec-2.1.2.3] |
+ | * synonymous: | ||
+ | ** 5-aminoimidazole-4-carboxamide ribonucleotide transformylase | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[AICAR]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c] '''<=>''' 1 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c] '''+''' 1 [[THF-GLU-N]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ21660]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123] |
− | ** '''4''' reactions found over ''' | + | ** '''4''' reactions found over '''6''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124] |
− | ** ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22195 22195] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R04560 R04560] |
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P43852 P43852] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P12048 P12048] |
− | {{#set: direction= | + | ** [http://www.uniprot.org/uniprot/P31335 P31335] |
− | {{#set: ec-number=ec- | + | ** [http://www.uniprot.org/uniprot/P26978 P26978] |
+ | ** [http://www.uniprot.org/uniprot/P15639 P15639] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PNY2 Q9PNY2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JUQ8 Q9JUQ8] | ||
+ | ** [http://www.uniprot.org/uniprot/P31939 P31939] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59493 Q59493] | ||
+ | ** [http://www.uniprot.org/uniprot/P38009 P38009] | ||
+ | ** [http://www.uniprot.org/uniprot/P54113 P54113] | ||
+ | ** [http://www.uniprot.org/uniprot/O64767 O64767] | ||
+ | ** [http://www.uniprot.org/uniprot/O74928 O74928] | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=aicar transformylase}} | ||
+ | {{#set: ec-number=ec-2.1.2.3}} | ||
+ | {{#set: synonymous=5-aminoimidazole-4-carboxamide ribonucleotide transformylase}} | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
{{#set: nb pathway associated=2}} | {{#set: nb pathway associated=2}} | ||
− | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 14:28, 26 August 2019
Contents
Reaction AICARTRANSFORM-RXN
- direction:
- reversible
- common-name:
- aicar transformylase
- ec-number:
- synonymous:
- 5-aminoimidazole-4-carboxamide ribonucleotide transformylase
Reaction formula
- 1 AICAR[c] + 1 FORMYL-THF-GLU-N[c] <=> 1 PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE[c] + 1 THF-GLU-N[c]
Gene(s) associated with this reaction
- Gene: SJ21660
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6123, inosine-5'-phosphate biosynthesis I: PWY-6123
- 4 reactions found over 6 reactions in the full pathway
- PWY-6124, inosine-5'-phosphate biosynthesis II: PWY-6124
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: