Difference between revisions of "SJ12574"

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(Created page with "Category:gene == Gene SJ04442 == * transcription-direction: ** negative * right-end-position: ** 452928 * left-end-position: ** 440350 * centisome-position: ** 86.19879...")
(Created page with "Category:gene == Gene SJ21895 == * transcription-direction: ** negative * right-end-position: ** 453714 * left-end-position: ** 427034 * centisome-position: ** 72.32373...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04442 ==
+
== Gene SJ21895 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 452928
+
** 453714
 
* left-end-position:
 
* left-end-position:
−
** 440350
+
** 427034
 
* centisome-position:
 
* centisome-position:
−
** 86.19879    
+
** 72.32373    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[LUMAZINESYN-RXN]]
+
* [[NADH-DEHYDROG-A-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-5330]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-9003]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-9384]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5180]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6167]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''5''' reactions found over '''10''' reactions in the full pathway
+
* [[PWY0-1335]]
−
* [[PWY-6168]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-4302]]
−
* [[RIBOSYN2-PWY]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-3781]]
−
* [[PWY-7235]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''3''' reactions found over '''n.a''' reactions in the full pathway
+
* [[PWY0-1334]]
−
* [[PWY3O-19]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-6692]]
−
* [[PWY-5815]]
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5083]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7279]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1573]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7269]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY0-1568]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY0-1567]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=452928}}
+
{{#set: right-end-position=453714}}
−
{{#set: left-end-position=440350}}
+
{{#set: left-end-position=427034}}
−
{{#set: centisome-position=86.19879   }}
+
{{#set: centisome-position=72.32373   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=11}}

Revision as of 09:26, 27 August 2019

Gene SJ21895

  • transcription-direction:
    • negative
  • right-end-position:
    • 453714
  • left-end-position:
    • 427034
  • centisome-position:
    • 72.32373

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1335
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-4302
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-3781
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1334
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6692
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7279
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1573
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7269
    • 5 reactions found over 5 reactions in the full pathway
  • PWY0-1568
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1567
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12574&oldid=30863"