Difference between revisions of "SJ10779"
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(Created page with "Category:gene == Gene SJ05645 == * transcription-direction: ** negative * right-end-position: ** 14528 * left-end-position: ** 9605 * centisome-position: ** 10.693610...") |
(Created page with "Category:gene == Gene SJ10220 == * transcription-direction: ** positive * right-end-position: ** 20464 * left-end-position: ** 3560 * centisome-position: ** 11.196377...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ10220 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 20464 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 3560 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 11.196377 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[3-DEHYDROQUINATE-SYNTHASE-RXN]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-9140]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | == Pathway(s) associated == |
| − | * [[ | + | * [[PWY-6164]] |
| − | ** | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| − | ** | + | * [[PWY-5818]] |
| − | * [[ | + | ** '''1''' reactions found over '''13''' reactions in the full pathway |
| − | ** | + | * [[PWY-7752]] |
| − | + | ** '''1''' reactions found over '''3''' reactions in the full pathway | |
| − | {{#set: transcription-direction= | + | {{#set: transcription-direction=positive}} |
| − | {{#set: right-end-position= | + | {{#set: right-end-position=20464}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=3560}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=11.196377 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| + | {{#set: nb pathway associated=3}} | ||
Revision as of 09:26, 27 August 2019
Contents
Gene SJ10220
- transcription-direction:
- positive
- right-end-position:
- 20464
- left-end-position:
- 3560
- centisome-position:
- 11.196377
Organism(s) associated with this gene
Reaction(s) associated
- 3-DEHYDROQUINATE-SYNTHASE-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-9140
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6164
- 2 reactions found over 2 reactions in the full pathway
- PWY-5818
- 1 reactions found over 13 reactions in the full pathway
- PWY-7752
- 1 reactions found over 3 reactions in the full pathway
