Difference between revisions of "SJ00717"

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(Created page with "Category:gene == Gene SJ16570 == * transcription-direction: ** positive * right-end-position: ** 274897 * left-end-position: ** 242002 * centisome-position: ** 86.6028...")
(Created page with "Category:gene == Gene SJ01760 == * transcription-direction: ** negative * right-end-position: ** 112752 * left-end-position: ** 79045 * centisome-position: ** 14.416615...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16570 ==
+
== Gene SJ01760 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 274897
+
** 112752
 
* left-end-position:
 
* left-end-position:
−
** 242002
+
** 79045
 
* centisome-position:
 
* centisome-position:
−
** 86.6028    
+
** 14.416615    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.3.16-RXN]]
+
* [[ARPT]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[FADSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RIBOFLAVINKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
* [[RXN0-5187]]
−
{{#set: right-end-position=274897}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=242002}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=86.6028   }}
+
== Pathway(s) associated ==
 +
* [[PWY66-366]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[RIBOSYN2-PWY]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6167]]
 +
** '''5''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6168]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7863]]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5523]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=112752}}
 +
{{#set: left-end-position=79045}}
 +
{{#set: centisome-position=14.416615   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=4}}
 +
{{#set: nb pathway associated=6}}

Revision as of 09:27, 27 August 2019

Gene SJ01760

  • transcription-direction:
    • negative
  • right-end-position:
    • 112752
  • left-end-position:
    • 79045
  • centisome-position:
    • 14.416615

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-366
    • 2 reactions found over 2 reactions in the full pathway
  • RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-6167
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-6168
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-7863
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-5523
    • 1 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00717&oldid=31811"