Difference between revisions of "CPD-729"

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(Created page with "Category:gene == Gene SJ01598 == * transcription-direction: ** positive * right-end-position: ** 86227 * left-end-position: ** 62172 * centisome-position: ** 42.02571...")
(Created page with "Category:gene == Gene SJ16195 == * transcription-direction: ** negative * right-end-position: ** 139212 * left-end-position: ** 132198 * centisome-position: ** 46.189003...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ01598 ==
+
== Gene SJ16195 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 86227
+
** 139212
 
* left-end-position:
 
* left-end-position:
** 62172
+
** 132198
 
* centisome-position:
 
* centisome-position:
** 42.02571    
+
** 46.189003    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[2.7.10.1-RXN]]
+
* [[3.1.3.16-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[2.7.12.1-RXN]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-14906]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-8443]]
+
{{#set: transcription-direction=negative}}
** Category: [[orthology]]
+
{{#set: right-end-position=139212}}
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=132198}}
== Pathway(s) associated ==
+
{{#set: centisome-position=46.189003   }}
* [[PWY-5381]]
 
** '''6''' reactions found over '''11''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=86227}}
 
{{#set: left-end-position=62172}}
 
{{#set: centisome-position=42.02571   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=1}}
 

Revision as of 09:27, 27 August 2019

Gene SJ16195

  • transcription-direction:
    • negative
  • right-end-position:
    • 139212
  • left-end-position:
    • 132198
  • centisome-position:
    • 46.189003

Organism(s) associated with this gene

Reaction(s) associated