Difference between revisions of "CPD-18077"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ16370 == * transcription-direction: ** negative * right-end-position: ** 141477 * left-end-position: ** 134611 * centisome-position: ** 47.60677...")
(Created page with "Category:gene == Gene SJ04582 == * transcription-direction: ** positive * right-end-position: ** 61635 * left-end-position: ** 33796 * centisome-position: ** 32.18452...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16370 ==
+
== Gene SJ04582 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 141477
+
** 61635
 
* left-end-position:
 
* left-end-position:
−
** 134611
+
** 33796
 
* centisome-position:
 
* centisome-position:
−
** 47.60677    
+
** 32.18452    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
* [[6PFRUCTPHOS-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[PFK_]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-1861]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-5484]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''10''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-1042]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''9''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[GLYCOLYSIS]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7385]]
−
{{#set: right-end-position=141477}}
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=134611}}
+
* [[ANAGLYCOLYSIS-PWY]]
−
{{#set: centisome-position=47.60677   }}
+
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=61635}}
 +
{{#set: left-end-position=33796}}
 +
{{#set: centisome-position=32.18452   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=6}}

Revision as of 09:28, 27 August 2019

Gene SJ04582

  • transcription-direction:
    • positive
  • right-end-position:
    • 61635
  • left-end-position:
    • 33796
  • centisome-position:
    • 32.18452

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-1861
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-7385
    • 7 reactions found over 9 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY
    • 10 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-18077&oldid=33415"