Difference between revisions of "MANNITOL"
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(Created page with "Category:gene == Gene SJ06172 == * transcription-direction: ** positive * right-end-position: ** 412816 * left-end-position: ** 388436 * centisome-position: ** 41.713352...") |
(Created page with "Category:gene == Gene SJ19262 == * transcription-direction: ** positive * right-end-position: ** 359577 * left-end-position: ** 354097 * centisome-position: ** 55.83101...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ19262 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 359577 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 354097 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 55.83101 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
− | |||
− | |||
− | |||
* [[ATPASE-RXN]] | * [[ATPASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
Line 24: | Line 25: | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-11109]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-11135]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* [[RXN-12195]] | * [[RXN-12195]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
Line 35: | Line 42: | ||
</div> | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
+ | * [[PWY-6797]] | ||
+ | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6147]] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7539]] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
* [[PWY-7210]] | * [[PWY-7210]] | ||
** '''8''' reactions found over '''8''' reactions in the full pathway | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
Line 44: | Line 57: | ||
** '''8''' reactions found over '''9''' reactions in the full pathway | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=359577}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=354097}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=55.83101 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=9}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=7}} |
Revision as of 09:28, 27 August 2019
Contents
Gene SJ19262
- transcription-direction:
- positive
- right-end-position:
- 359577
- left-end-position:
- 354097
- centisome-position:
- 55.83101
Organism(s) associated with this gene
Reaction(s) associated
- ATPASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- NUCLEOSIDE-TRIPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-11109
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-11135
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-12195
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12196
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5462
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6797
- 3 reactions found over 7 reactions in the full pathway
- PWY-6147
- 5 reactions found over 5 reactions in the full pathway
- PWY-7539
- 4 reactions found over 5 reactions in the full pathway
- PWY-7210
- 8 reactions found over 8 reactions in the full pathway
- PWY-7198
- 6 reactions found over 7 reactions in the full pathway
- PWY-7184
- 9 reactions found over 9 reactions in the full pathway
- PWY-6545
- 8 reactions found over 9 reactions in the full pathway