Difference between revisions of "CPD-17858"

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(Created page with "Category:gene == Gene SJ07066 == * transcription-direction: ** positive * right-end-position: ** 180256 * left-end-position: ** 177130 * centisome-position: ** 38.146286...")
(Created page with "Category:gene == Gene SJ07716 == * transcription-direction: ** positive * right-end-position: ** 365196 * left-end-position: ** 354288 * centisome-position: ** 40.035755...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ07066 ==
+
== Gene SJ07716 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 180256
+
** 365196
 
* left-end-position:
 
* left-end-position:
** 177130
+
** 354288
 
* centisome-position:
 
* centisome-position:
** 38.146286    
+
** 40.035755    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-12477]]
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[DOLICHYLDIPHOSPHATASE-RXN]]
+
* [[RXN-12478]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[RXN-12479]]
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-16030]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-16121]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-17730]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[TRIGLSYN-PWY]]
+
* [[PWY-6829]]
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''11''' reactions found over '''15''' reactions in the full pathway
* [[PWY-6453]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7782]]
 
** '''11''' reactions found over '''16''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=180256}}
+
{{#set: right-end-position=365196}}
{{#set: left-end-position=177130}}
+
{{#set: left-end-position=354288}}
{{#set: centisome-position=38.146286   }}
+
{{#set: centisome-position=40.035755   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}

Revision as of 09:28, 27 August 2019

Gene SJ07716

  • transcription-direction:
    • positive
  • right-end-position:
    • 365196
  • left-end-position:
    • 354288
  • centisome-position:
    • 40.035755

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6829
    • 11 reactions found over 15 reactions in the full pathway