Difference between revisions of "DMPBQ"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=M5TAP M5TAP] == * direction: ** left-to-right * common-name: ** s-methyl-5'-thioadenosine phosphory...")
(Created page with "Category:gene == Gene SJ19843 == * transcription-direction: ** negative * right-end-position: ** 134224 * left-end-position: ** 117390 * centisome-position: ** 53.616207...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=M5TAP M5TAP] ==
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== Gene SJ19843 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** negative
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* common-name:
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* right-end-position:
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** s-methyl-5'-thioadenosine phosphorylase
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** 134224
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== Reaction formula ==
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* left-end-position:
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* 1.0 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1.0 [[Pi]][c] '''=>''' 1.0 [[ADENINE]][c] '''+''' 1.0 [[CPD-444]][c]
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** 117390
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[SJ03195]]
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** 53.616207   
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** Category: [[orthology]]
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== Organism(s) associated with this gene  ==
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[S.japonica_carotenoid_curated]]
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== Pathway(s)  ==
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== Reaction(s) associated ==
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== Reconstruction information  ==
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* [[PEROXID-RXN]]
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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** Category: [[annotation]]
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== External links  ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: direction=left-to-right}}
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* [[RXN-14240]]
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{{#set: common-name=s-methyl-5'-thioadenosine phosphorylase}}
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** Category: [[annotation]]
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{{#set: nb gene associated=1}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: nb pathway associated=0}}
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* [[RXN-15288]]
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{{#set: reconstruction category=orthology}}
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** Category: [[annotation]]
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{{#set: reconstruction tool=pantograph}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: reconstruction comment=n.a}}
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* [[RXN-17352]]
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-8635]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7214]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7445]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5466]]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6824]]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5469]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5461]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=134224}}
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{{#set: left-end-position=117390}}
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{{#set: centisome-position=53.616207    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=6}}

Revision as of 09:28, 27 August 2019

Gene SJ19843

  • transcription-direction:
    • negative
  • right-end-position:
    • 134224
  • left-end-position:
    • 117390
  • centisome-position:
    • 53.616207

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




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