Difference between revisions of "CPD-22766"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16042 RXN-16042] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:gene == Gene SJ17528 == * transcription-direction: ** negative * right-end-position: ** 15584 * left-end-position: ** 12971 * centisome-position: ** 4.9769974...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16042 RXN-16042] ==
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== Gene SJ17528 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** negative
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* ec-number:
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* right-end-position:
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** [http://enzyme.expasy.org/EC/2.3.1.23 ec-2.3.1.23]
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** 15584
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== Reaction formula ==
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* left-end-position:
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* 1 [[CPD-14394]][c] '''+''' 1 [[Glycerolipids]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17281]][c]
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** 12971
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[SJ09127]]
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** 4.9769974   
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== Organism(s) associated with this gene  ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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* [[RXN-13685]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17897]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* Gene: [[SJ22477]]
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== Pathway(s) associated ==
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** Category: [[annotation]]
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* [[PWY-7230]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** '''3''' reactions found over '''9''' reactions in the full pathway
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* Gene: [[SJ13643]]
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{{#set: transcription-direction=negative}}
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** Category: [[annotation]]
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{{#set: right-end-position=15584}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: left-end-position=12971}}
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== Pathway(s) ==
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{{#set: centisome-position=4.9769974    }}
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* [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6958 PWY-6958]
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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** '''5''' reactions found over '''8''' reactions in the full pathway
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{{#set: nb reaction associated=2}}
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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{{#set: direction=left-to-right}}
 
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{{#set: ec-number=ec-2.3.1.23}}
 
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{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 09:28, 27 August 2019

Gene SJ17528

  • transcription-direction:
    • negative
  • right-end-position:
    • 15584
  • left-end-position:
    • 12971
  • centisome-position:
    • 4.9769974

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7230
    • 3 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-22766&oldid=34357"