Difference between revisions of "DNA-Ligase-L-lysine-adenylate"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] == * direction: ** left-...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13295 RXN-13295] == * direction: ** left-to-right * common-name: ** 3-oxo-behenoyl-coa synthase...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13295 RXN-13295] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** deoxyribodipyrimidine photolyase
+
** 3-oxo-behenoyl-coa synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.99.3 ec-4.1.99.3]
+
** [http://enzyme.expasy.org/EC/2.3.1.199 ec-2.3.1.199]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DNA-deoxycytidine-thymidine-dimer]][c] '''+''' 1 [[Light]][c] '''=>''' 1 [[DNA-Cytidines]][c] '''+''' 1 [[DNA-thymidines]][c]
+
* 1 [[CPD-9965]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-10283]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08112]]
+
* Gene: [[SJ11672]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ19629]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04101]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ00613]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ13192]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ06616]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036]
 +
** '''14''' reactions found over '''16''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00034 R00034]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P12769 P12769]
 
−
** [http://www.uniprot.org/uniprot/Q9JSP8 Q9JSP8]
 
−
** [http://www.uniprot.org/uniprot/Q9HQ46 Q9HQ46]
 
−
** [http://www.uniprot.org/uniprot/P12768 P12768]
 
−
** [http://www.uniprot.org/uniprot/P27526 P27526]
 
−
** [http://www.uniprot.org/uniprot/P25078 P25078]
 
−
** [http://www.uniprot.org/uniprot/Q43125 Q43125]
 
−
** [http://www.uniprot.org/uniprot/P40115 P40115]
 
−
** [http://www.uniprot.org/uniprot/Q28811 Q28811]
 
−
** [http://www.uniprot.org/uniprot/Q24443 Q24443]
 
−
** [http://www.uniprot.org/uniprot/Q91186 Q91186]
 
−
** [http://www.uniprot.org/uniprot/Q42696 Q42696]
 
−
** [http://www.uniprot.org/uniprot/P05066 P05066]
 
−
** [http://www.uniprot.org/uniprot/O24020 O24020]
 
−
** [http://www.uniprot.org/uniprot/O24374 O24374]
 
−
** [http://www.uniprot.org/uniprot/P00914 P00914]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=deoxyribodipyrimidine photolyase}}
+
{{#set: common-name=3-oxo-behenoyl-coa synthase}}
−
{{#set: ec-number=ec-4.1.99.3}}
+
{{#set: ec-number=ec-2.3.1.199}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction RXN-13295

  • direction:
    • left-to-right
  • common-name:
    • 3-oxo-behenoyl-coa synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7036, very long chain fatty acid biosynthesis II: PWY-7036
    • 14 reactions found over 16 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=DNA-Ligase-L-lysine-adenylate&oldid=34471"