Difference between revisions of "CPD-374"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15830 RXN-15830] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] == * direction: ** rever...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
+ | * common-name: | ||
+ | ** 3-methyl-2-oxobutanoate hydroxymethyltransferase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/1. | + | ** [http://enzyme.expasy.org/EC/2.1.2.11 ec-2.1.2.11] |
== Reaction formula == | == Reaction formula == | ||
− | * | + | * 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-DEHYDROPANTOATE]][c] '''+''' 1 [[THF-GLU-N]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ10361]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY | + | * [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY] |
− | ** ''' | + | ** '''4''' reactions found over '''4''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: ec-number=ec-1. | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11827 11827] |
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01226 R01226] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q9V0E1 Q9V0E1] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JUY0 Q9JUY0] | ||
+ | ** [http://www.uniprot.org/uniprot/P31057 P31057] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PIK1 Q9PIK1] | ||
+ | ** [http://www.uniprot.org/uniprot/P38122 P38122] | ||
+ | ** [http://www.uniprot.org/uniprot/Q09672 Q09672] | ||
+ | ** [http://www.uniprot.org/uniprot/P52997 P52997] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X712 Q9X712] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Y7B6 Q9Y7B6] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9L7B2 Q9L7B2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RKS2 Q9RKS2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RLE2 Q9RLE2] | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=3-methyl-2-oxobutanoate hydroxymethyltransferase}} | ||
+ | {{#set: ec-number=ec-2.1.2.11}} | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
− | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}} | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Revision as of 09:29, 27 August 2019
Contents
Reaction 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN
- direction:
- reversible
- common-name:
- 3-methyl-2-oxobutanoate hydroxymethyltransferase
- ec-number:
Reaction formula
- 1 2-KETO-ISOVALERATE[c] + 1 METHYLENE-THF-GLU-N[c] + 1 WATER[c] <=> 1 2-DEHYDROPANTOATE[c] + 1 THF-GLU-N[c]
Gene(s) associated with this reaction
- Gene: SJ10361
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PANTO-PWY, phosphopantothenate biosynthesis I: PANTO-PWY
- 4 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: