Difference between revisions of "GDPMANDEHYDRA-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFITE-REDUCT-RXN SULFITE-REDUCT-RXN] == * direction: ** left-to-right * ec-number: ** [http://enz...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ANTHRANSYN-RXN ANTHRANSYN-RXN] == * direction: ** reversible * common-name: ** anthranilate synthas...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFITE-REDUCT-RXN SULFITE-REDUCT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ANTHRANSYN-RXN ANTHRANSYN-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** anthranilate synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.8.1.2 ec-1.8.1.2]
+
** [http://enzyme.expasy.org/EC/4.1.3.27 ec-4.1.3.27]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 3 [[NADPH]][c] '''+''' 5 [[PROTON]][c] '''+''' 1 [[SO3]][c] '''=>''' 1 [[HS]][c] '''+''' 3 [[NADP]][c] '''+''' 3 [[WATER]][c]
+
* 1 [[CHORISMATE]][c] '''+''' 1 [[GLN]][c] '''<=>''' 1 [[ANTHRANILATE]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ17628]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ01083]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[SO4ASSIM-PWY]], assimilatory sulfate reduction I: [http://metacyc.org/META/NEW-IMAGE?object=SO4ASSIM-PWY SO4ASSIM-PWY]
+
* [[PWY-5958]], acridone alkaloid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5958 PWY-5958]
−
** '''3''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6683]], assimilatory sulfate reduction III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6683 PWY-6683]
+
* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6661]], 4-hydroxy-2(1H)-quinolone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6661 PWY-6661]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6660]], 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6660 PWY-6660]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13803 13803]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21735 21735]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00858 R00858]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00986 R00986]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P38039 P38039]
+
** [http://www.uniprot.org/uniprot/P00897 P00897]
−
** [http://www.uniprot.org/uniprot/P17845 P17845]
+
** [http://www.uniprot.org/uniprot/P15395 P15395]
−
** [http://www.uniprot.org/uniprot/Q9JUD9 Q9JUD9]
+
** [http://www.uniprot.org/uniprot/P21690 P21690]
−
** [http://www.uniprot.org/uniprot/Q9JUD8 Q9JUD8]
+
** [http://www.uniprot.org/uniprot/P33975 P33975]
−
** [http://www.uniprot.org/uniprot/O32214 O32214]
+
** [http://www.uniprot.org/uniprot/Q9PIF4 Q9PIF4]
−
** [http://www.uniprot.org/uniprot/P38038 P38038]
+
** [http://www.uniprot.org/uniprot/P06557 P06557]
−
** [http://www.uniprot.org/uniprot/Q59396 Q59396]
+
** [http://www.uniprot.org/uniprot/P20463 P20463]
−
** [http://www.uniprot.org/uniprot/P17846 P17846]
+
** [http://www.uniprot.org/uniprot/P09786 P09786]
−
** [http://www.uniprot.org/uniprot/P52674 P52674]
+
** [http://www.uniprot.org/uniprot/Q06129 Q06129]
−
** [http://www.uniprot.org/uniprot/P39692 P39692]
+
** [http://www.uniprot.org/uniprot/P33974 P33974]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/Q9R5Z6 Q9R5Z6]
−
{{#set: ec-number=ec-1.8.1.2}}
+
** [http://www.uniprot.org/uniprot/Q58475 Q58475]
−
{{#set: nb gene associated=0}}
+
** [http://www.uniprot.org/uniprot/P20441 P20441]
−
{{#set: nb pathway associated=2}}
+
** [http://www.uniprot.org/uniprot/P43761 P43761]
−
{{#set: reconstruction category=gap-filling}}
+
** [http://www.uniprot.org/uniprot/Q57686 Q57686]
−
{{#set: reconstruction tool=meneco}}
+
** [http://www.uniprot.org/uniprot/Q08654 Q08654]
−
{{#set: reconstruction comment=added for gapfilling}}
+
** [http://www.uniprot.org/uniprot/Q8X3T2 Q8X3T2]
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
** [http://www.uniprot.org/uniprot/P20580 P20580]
 +
** [http://www.uniprot.org/uniprot/Q08653 Q08653]
 +
** [http://www.uniprot.org/uniprot/Q8X3T1 Q8X3T1]
 +
** [http://www.uniprot.org/uniprot/P20579 P20579]
 +
** [http://www.uniprot.org/uniprot/P09785 P09785]
 +
** [http://www.uniprot.org/uniprot/Q9JUS0 Q9JUS0]
 +
** [http://www.uniprot.org/uniprot/Q02001 Q02001]
 +
** [http://www.uniprot.org/uniprot/Q57690 Q57690]
 +
** [http://www.uniprot.org/uniprot/Q9XAZ0 Q9XAZ0]
 +
** [http://www.uniprot.org/uniprot/Q9PIF5 Q9PIF5]
 +
** [http://www.uniprot.org/uniprot/P42387 P42387]
 +
** [http://www.uniprot.org/uniprot/P42388 P42388]
 +
** [http://www.uniprot.org/uniprot/Q06128 Q06128]
 +
** [http://www.uniprot.org/uniprot/P18267 P18267]
 +
** [http://www.uniprot.org/uniprot/P32068 P32068]
 +
** [http://www.uniprot.org/uniprot/Q42565 Q42565]
 +
** [http://www.uniprot.org/uniprot/P20409 P20409]
 +
** [http://www.uniprot.org/uniprot/P14953 P14953]
 +
** [http://www.uniprot.org/uniprot/P03963 P03963]
 +
** [http://www.uniprot.org/uniprot/P00899 P00899]
 +
** [http://www.uniprot.org/uniprot/P00937 P00937]
 +
** [http://www.uniprot.org/uniprot/P00896 P00896]
 +
** [http://www.uniprot.org/uniprot/P00898 P00898]
 +
** [http://www.uniprot.org/uniprot/P00906 P00906]
 +
** [http://www.uniprot.org/uniprot/P00905 P00905]
 +
** [http://www.uniprot.org/uniprot/P00895 P00895]
 +
** [http://www.uniprot.org/uniprot/P00904 P00904]
 +
** [http://www.uniprot.org/uniprot/P00902 P00902]
 +
** [http://www.uniprot.org/uniprot/P00908 P00908]
 +
** [http://www.uniprot.org/uniprot/P00901 P00901]
 +
** [http://www.uniprot.org/uniprot/P00900 P00900]
 +
** [http://www.uniprot.org/uniprot/P14952 P14952]
 +
** [http://www.uniprot.org/uniprot/P05328 P05328]
 +
** [http://www.uniprot.org/uniprot/P06531 P06531]
 +
** [http://www.uniprot.org/uniprot/P23315 P23315]
 +
** [http://www.uniprot.org/uniprot/P25170 P25170]
 +
** [http://www.uniprot.org/uniprot/P30526 P30526]
 +
** [http://www.uniprot.org/uniprot/P32069 P32069]
 +
** [http://www.uniprot.org/uniprot/P24773 P24773]
 +
** [http://www.uniprot.org/uniprot/Q02003 Q02003]
 +
** [http://www.uniprot.org/uniprot/P51362 P51362]
 +
** [http://www.uniprot.org/uniprot/Q55144 Q55144]
 +
** [http://www.uniprot.org/uniprot/P20170 P20170]
 +
** [http://www.uniprot.org/uniprot/P74130 P74130]
 +
** [http://www.uniprot.org/uniprot/O81533 O81533]
 +
** [http://www.uniprot.org/uniprot/Q08073 Q08073]
 +
** [http://www.uniprot.org/uniprot/P48261 P48261]
 +
** [http://www.uniprot.org/uniprot/Q92370 Q92370]
 +
** [http://www.uniprot.org/uniprot/Q9S593 Q9S593]
 +
** [http://www.uniprot.org/uniprot/Q9X7C5 Q9X7C5]
 +
** [http://www.uniprot.org/uniprot/Q9RQG2 Q9RQG2]
 +
** [http://www.uniprot.org/uniprot/Q9ZFA9 Q9ZFA9]
 +
** [http://www.uniprot.org/uniprot/Q41156 Q41156]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=anthranilate synthase}}
 +
{{#set: ec-number=ec-4.1.3.27}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}

Revision as of 09:30, 27 August 2019

Reaction ANTHRANSYN-RXN

  • direction:
    • reversible
  • common-name:
    • anthranilate synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5958, acridone alkaloid biosynthesis: PWY-5958
    • 1 reactions found over 4 reactions in the full pathway
  • TRPSYN-PWY, L-tryptophan biosynthesis: TRPSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6661, 4-hydroxy-2(1H)-quinolone biosynthesis: PWY-6661
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6660, 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis: PWY-6660
    • 1 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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