Difference between revisions of "TDSR"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11396 RXN-11396] == * direction: ** left-to-right * common-name: ** 8-oxo-dgtp diphosphatase *...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16624 RXN-16624] == * direction: ** left-to-right * common-name: ** (2e,7z)-hexadeca-2,7-dienoy...") |
||
| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16624 RXN-16624] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** (2e,7z)-hexadeca-2,7-dienoyl-[acp] |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/3 | + | ** [http://enzyme.expasy.org/EC/1.3.1.9 ec-1.3.1.9] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[2E-7Z-hexadeca-2-7-dienoyl-ACPs]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[7Z-hexadec-7-enoyl-ACPs]][c] '''+''' 1 [[NAD]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ03883]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | *** Source: [[ | + | * Gene: [[SJ00320]] |
| − | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664] |
| − | ** ''' | + | ** '''13''' reactions found over '''14''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| − | |||
| − | |||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=(2e,7z)-hexadeca-2,7-dienoyl-[acp]}} |
| − | {{#set: ec-number=ec-3 | + | {{#set: ec-number=ec-1.3.1.9}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=2}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Revision as of 09:30, 27 August 2019
Contents
Reaction RXN-16624
- direction:
- left-to-right
- common-name:
- (2e,7z)-hexadeca-2,7-dienoyl-[acp]
- ec-number:
Reaction formula
- 1 2E-7Z-hexadeca-2-7-dienoyl-ACPs[c] + 1 NADH[c] + 1 PROTON[c] => 1 7Z-hexadec-7-enoyl-ACPs[c] + 1 NAD[c]
Gene(s) associated with this reaction
- Gene: SJ03883
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ00320
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7664, oleate biosynthesis IV (anaerobic): PWY-7664
- 13 reactions found over 14 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
Property "Common-name" (as page type) with input value "(2e,7z)-hexadeca-2,7-dienoyl-[acp" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
