Difference between revisions of "HPPD"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-747 RXN0-747] == * direction: ** left-to-right * common-name: ** 2'-deoxyadenosine 5'-diphosph...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINESTERASE-RXN CHOLINESTERASE-RXN] == * direction: ** left-to-right * ec-number: ** [http://enz...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-747 RXN0-747] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINESTERASE-RXN CHOLINESTERASE-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 2'-deoxyadenosine 5'-diphosphate:oxidized nrdh glutaredoxin-like protein oxidoreductase
 
−
** ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.17.4.1 ec-1.17.4.1]
+
** [http://enzyme.expasy.org/EC/3.1.1.8 ec-3.1.1.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADP]][c] '''+''' 1 [[Reduced-NrdH-Proteins]][c] '''=>''' 1 [[DADP]][c] '''+''' 1 [[Oxidized-NrdH-Proteins]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[Acylcholines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CHOLINE]][c] '''+''' 1 [[Carboxylates]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ02498]]
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* Gene: [[SJ17066]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ03697]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ21120]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03698]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ18284]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21121]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ20794]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ16809]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ14458]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21964 21964]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01029 R01029]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P06276 P06276]
 +
** [http://www.uniprot.org/uniprot/P32753 P32753]
 +
** [http://www.uniprot.org/uniprot/P21927 P21927]
 +
** [http://www.uniprot.org/uniprot/P32752 P32752]
 +
** [http://www.uniprot.org/uniprot/P32750 P32750]
 +
** [http://www.uniprot.org/uniprot/P32749 P32749]
 +
** [http://www.uniprot.org/uniprot/P32751 P32751]
 +
** [http://www.uniprot.org/uniprot/Q03311 Q03311]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor|2'-deoxyadenosine 5'-diphosphate:oxidized nrdh glutaredoxin-like protein oxidoreductase}}
+
{{#set: ec-number=ec-3.1.1.8}}
−
{{#set: ec-number=ec-1.17.4.1}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=9}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:30, 27 August 2019

Reaction CHOLINESTERASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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