Difference between revisions of "UGD-RXN"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17203 RXN-17203] == * direction: ** reversible * common-name: ** galactosylceramide sulfotransf...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHASERSYN-RXN PHOSPHASERSYN-RXN] == * direction: ** reversible * common-name: ** cdp-diacylglyc...") |
||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHASERSYN-RXN PHOSPHASERSYN-RXN] == |
* direction: | * direction: | ||
** reversible | ** reversible | ||
* common-name: | * common-name: | ||
− | ** | + | ** cdp-diacylglycerol-serine o-phosphatidyltransferase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2.8. | + | ** [http://enzyme.expasy.org/EC/2.7.8.8 ec-2.7.8.8] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[CDPDIACYLGLYCEROL]][c] '''+''' 1 [[SER]][c] '''<=>''' 1 [[CMP]][c] '''+''' 1 [[L-1-PHOSPHATIDYL-SERINE]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[SJ19545]] | |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PHOSLIPSYN2-PWY]], superpathway of phospholipid biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PHOSLIPSYN2-PWY PHOSLIPSYN2-PWY] | ||
+ | ** '''13''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5669]], phosphatidylserine and phosphatidylethanolamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5669 PWY-5669] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | |||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16916 16916] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01800 R01800] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P39823 P39823] | ||
+ | ** [http://www.uniprot.org/uniprot/O27106 O27106] | ||
+ | ** [http://www.uniprot.org/uniprot/P96282 P96282] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZM68 Q9ZM68] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58609 Q58609] | ||
+ | ** [http://www.uniprot.org/uniprot/O28235 O28235] | ||
+ | ** [http://www.uniprot.org/uniprot/O84833 O84833] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z6S6 Q9Z6S6] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JR61 Q9JR61] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PNI0 Q9PNI0] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZDT3 Q9ZDT3] | ||
+ | ** [http://www.uniprot.org/uniprot/Q48269 Q48269] | ||
+ | ** [http://www.uniprot.org/uniprot/Q8X9F5 Q8X9F5] | ||
+ | ** [http://www.uniprot.org/uniprot/P08456 P08456] | ||
+ | ** [http://www.uniprot.org/uniprot/P25578 P25578] | ||
+ | </div> | ||
{{#set: direction=reversible}} | {{#set: direction=reversible}} | ||
− | {{#set: common-name= | + | {{#set: common-name=cdp-diacylglycerol-serine o-phosphatidyltransferase}} |
− | {{#set: ec-number=ec-2.8. | + | {{#set: ec-number=ec-2.7.8.8}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=1}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
− | {{#set: reconstruction category=orthology | + | {{#set: reconstruction category=annotation|orthology}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Revision as of 09:31, 27 August 2019
Contents
Reaction PHOSPHASERSYN-RXN
- direction:
- reversible
- common-name:
- cdp-diacylglycerol-serine o-phosphatidyltransferase
- ec-number:
Reaction formula
- 1 CDPDIACYLGLYCEROL[c] + 1 SER[c] <=> 1 CMP[c] + 1 L-1-PHOSPHATIDYL-SERINE[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ19545
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PHOSLIPSYN2-PWY, superpathway of phospholipid biosynthesis II (plants): PHOSLIPSYN2-PWY
- 13 reactions found over 3 reactions in the full pathway
- PWY-5669, phosphatidylserine and phosphatidylethanolamine biosynthesis I: PWY-5669
- 1 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links