Difference between revisions of "SJ03172"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13188 CPD-13188] == * common-name: ** β-d-glcp-(1→4)-α-l-rhap-(1→3)-d-...")
(Created page with "Category:gene == Gene SJ14158 == * transcription-direction: ** positive * right-end-position: ** 322541 * left-end-position: ** 309232 * centisome-position: ** 43.041008...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13188 CPD-13188] ==
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== Gene SJ14158 ==
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* common-name:
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* transcription-direction:
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** β-d-glcp-(1→4)-α-l-rhap-(1→3)-d-glcp
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** positive
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* smiles:
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* right-end-position:
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** cc2(oc(oc1(c(o)c(o)oc(co)c(o)1))c(o)c(o)c2oc3(oc(co)c(c(o)c(o)3)o))
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** 322541
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* inchi-key:
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* left-end-position:
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** cwvrqjbcbctflt-civpzrojsa-n
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** 309232
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* molecular-weight:
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* centisome-position:
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** 488.442
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** 43.041008   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_sterols_curated]]
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* [[RXN-12270]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[ATPASE-RXN]]
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{{#set: common-name=β-d-glcp-(1→4)-α-l-rhap-(1→3)-d-glcp}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=cwvrqjbcbctflt-civpzrojsa-n}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=488.442}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=322541}}
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{{#set: left-end-position=309232}}
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{{#set: centisome-position=43.041008    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Revision as of 20:19, 18 December 2020

Gene SJ14158

  • transcription-direction:
    • positive
  • right-end-position:
    • 322541
  • left-end-position:
    • 309232
  • centisome-position:
    • 43.041008

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03172&oldid=40736"