Difference between revisions of "SJ02523"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SECOLOGANIN-CPD SECOLOGANIN-CPD] == * common-name: ** secologanin * smiles: ** c=c[ch]1(c(oc=c(...")
(Created page with "Category:gene == Gene SJ08968 == * transcription-direction: ** negative * right-end-position: ** 9921 * left-end-position: ** 5919 * centisome-position: ** 0.7205779 =...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SECOLOGANIN-CPD SECOLOGANIN-CPD] ==
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== Gene SJ08968 ==
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* common-name:
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* transcription-direction:
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** secologanin
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** negative
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* smiles:
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* right-end-position:
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** c=c[ch]1(c(oc=c(c(=o)oc)[ch](cc=o)1)oc2(oc(co)c(o)c(o)c(o)2))
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** 9921
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* inchi-key:
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* left-end-position:
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** cskkdsfetglmsb-nrzpkykesa-n
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** 5919
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* molecular-weight:
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* centisome-position:
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** 388.371
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** 0.7205779   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[STRICTOSIDINE-SYNTHASE-RXN]]
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* [[S.japonica_sterols_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[3.1.26.3-RXN]]
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{{#set: common-name=secologanin}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=cskkdsfetglmsb-nrzpkykesa-n}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=388.371}}
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* [[ATPASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=9921}}
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{{#set: left-end-position=5919}}
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{{#set: centisome-position=0.7205779    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=4}}

Revision as of 20:20, 18 December 2020

Gene SJ08968

  • transcription-direction:
    • negative
  • right-end-position:
    • 9921
  • left-end-position:
    • 5919
  • centisome-position:
    • 0.7205779

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




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