Difference between revisions of "SJ02536"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GDP-MANNOSE GDP-MANNOSE] == * common-name: ** gdp-α-d-mannose * smiles: ** c(op([o-])(=o)...")
(Created page with "Category:gene == Gene SJ02793 == * transcription-direction: ** positive * right-end-position: ** 507584 * left-end-position: ** 468546 * centisome-position: ** 43.193798...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GDP-MANNOSE GDP-MANNOSE] ==
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== Gene SJ02793 ==
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* common-name:
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* transcription-direction:
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** gdp-α-d-mannose
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** positive
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* smiles:
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* right-end-position:
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** c(op([o-])(=o)op([o-])(=o)oc1(oc(c(o)c(o)c(o)1)co))c2(c(o)c(o)c(o2)n4(c=nc3(c(=o)nc(n)=nc=34)))
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** 507584
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* inchi-key:
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* left-end-position:
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** mvmscbbuihutgj-gdjbgnaasa-l
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** 468546
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* molecular-weight:
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* centisome-position:
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** 603.329
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** 43.193798   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[2.4.1.142-RXN]]
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* [[S.japonica_sterols_curated]]
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* [[2.4.1.83-RXN]]
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== Reaction(s) associated ==
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* [[GDP-MANNOSE-6-DEHYDROGENASE-RXN]]
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* [[3.6.3.43-RXN]]
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* [[GDPMANDEHYDRA-RXN]]
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** Category: [[annotation]]
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* [[MANNPGUANYLTRANGDP-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-16602]]
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* [[ATPASE-RXN]]
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* [[RXN-1882]]
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** Category: [[annotation]]
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* [[RXN-5462]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-5463]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[RXN-5464]]
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** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[MANNPGUANYLTRANGDP-RXN]]
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* [[RXN-12195]]
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* [[RXN-1882]]
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** Category: [[annotation]]
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* [[RXN4FS-12]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[RXN-12196]]
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{{#set: common-name=gdp-α-d-mannose}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=mvmscbbuihutgj-gdjbgnaasa-l}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=603.329}}
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=507584}}
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{{#set: left-end-position=468546}}
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{{#set: centisome-position=43.193798    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=4}}

Revision as of 20:20, 18 December 2020

Gene SJ02793

  • transcription-direction:
    • positive
  • right-end-position:
    • 507584
  • left-end-position:
    • 468546
  • centisome-position:
    • 43.193798

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




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