Difference between revisions of "SJ04806"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SARCOSINE SARCOSINE] == * common-name: ** sarcosine * smiles: ** c[n+]cc(=o)[o-] * inchi-key: *...")
(Created page with "Category:gene == Gene SJ00542 == * transcription-direction: ** positive * right-end-position: ** 147098 * left-end-position: ** 104493 * centisome-position: ** 63.066124...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SARCOSINE SARCOSINE] ==
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== Gene SJ00542 ==
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* common-name:
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* transcription-direction:
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** sarcosine
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** positive
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* smiles:
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* right-end-position:
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** c[n+]cc(=o)[o-]
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** 147098
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* inchi-key:
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* left-end-position:
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** fsykklyzxjsnpz-uhfffaoysa-n
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** 104493
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* molecular-weight:
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* centisome-position:
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** 89.094
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** 63.066124   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-13405]]
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* [[S.japonica_sterols_curated]]
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* [[RXN-8673]]
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== Reaction(s) associated ==
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* [[RXN-9679]]
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* [[ATPASE-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[CREATINASE-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[GLYCINE-N-METHYLTRANSFERASE-RXN]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=sarcosine}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=fsykklyzxjsnpz-uhfffaoysa-n}}
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* [[RXN-11135]]
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{{#set: molecular-weight=89.094}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=147098}}
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{{#set: left-end-position=104493}}
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{{#set: centisome-position=63.066124    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=4}}

Revision as of 20:20, 18 December 2020

Gene SJ00542

  • transcription-direction:
    • positive
  • right-end-position:
    • 147098
  • left-end-position:
    • 104493
  • centisome-position:
    • 63.066124

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04806&oldid=41051"