Difference between revisions of "SJ11729"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9646 CPD-9646] == * common-name: ** di-trans,octa-cis-undecaprenyl phosphate * smiles: ** c...")
(Created page with "Category:gene == Gene SJ13292 == * transcription-direction: ** negative * right-end-position: ** 54819 * left-end-position: ** 24231 * centisome-position: ** 7.063875...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9646 CPD-9646] ==
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== Gene SJ13292 ==
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* common-name:
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* transcription-direction:
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** di-trans,octa-cis-undecaprenyl phosphate
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** negative
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* smiles:
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* right-end-position:
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** cc(=cccc(=cccc(=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=ccop(=o)([o-])[o-])c)c)c
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** 54819
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* inchi-key:
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* left-end-position:
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** ufphfkctoziafy-ntdveaecsa-l
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** 24231
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* molecular-weight:
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* centisome-position:
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** 845.279
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** 7.063875   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[PHOSNACMURPENTATRANS-RXN]]
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* [[S.japonica_sterols_curated]]
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* [[RXN-11347]]
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== Reaction(s) associated ==
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* [[RXN-8975]]
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* [[3.1.3.16-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[RXN-8975]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[4-NITROPHENYLPHOSPHATASE-RXN]]
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{{#set: common-name=di-trans,octa-cis-undecaprenyl phosphate}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=ufphfkctoziafy-ntdveaecsa-l}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=845.279}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10958]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6368]]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6580]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6367]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=54819}}
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{{#set: left-end-position=24231}}
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{{#set: centisome-position=7.063875    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=3}}

Revision as of 20:20, 18 December 2020

Gene SJ13292

  • transcription-direction:
    • negative
  • right-end-position:
    • 54819
  • left-end-position:
    • 24231
  • centisome-position:
    • 7.063875

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6368
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-6580
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6367
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11729&oldid=41083"