Difference between revisions of "SJ10816"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11529 CPD-11529] == * common-name: ** (+)-7-epi-jasmonoyl-coa * smiles: ** ccc=ccc1(c(=o)cc...")
(Created page with "Category:gene == Gene SJ16348 == * transcription-direction: ** negative * right-end-position: ** 244477 * left-end-position: ** 233534 * centisome-position: ** 81.97627...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11529 CPD-11529] ==
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== Gene SJ16348 ==
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* common-name:
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* transcription-direction:
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** (+)-7-epi-jasmonoyl-coa
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** negative
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* smiles:
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* right-end-position:
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** ccc=ccc1(c(=o)ccc1cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-])=o)
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** 244477
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* inchi-key:
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* left-end-position:
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** wqkkcppndksaiu-cbgydujusa-j
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** 233534
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* molecular-weight:
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* centisome-position:
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** 955.76
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** 81.97627   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-10708]]
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* [[S.japonica_sterols_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-10701]]
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* [[2.8.1.6-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(+)-7-epi-jasmonoyl-coa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=wqkkcppndksaiu-cbgydujusa-j}}
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** Category: [[orthology]]
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{{#set: molecular-weight=955.76}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-17472]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-17473]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY0-1507]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7380]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=244477}}
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{{#set: left-end-position=233534}}
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{{#set: centisome-position=81.97627    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=2}}

Revision as of 20:20, 18 December 2020

Gene SJ16348

  • transcription-direction:
    • negative
  • right-end-position:
    • 244477
  • left-end-position:
    • 233534
  • centisome-position:
    • 81.97627

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1507
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7380
    • 2 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10816&oldid=41114"