Difference between revisions of "SJ06413"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-ALPHA-HYDROXYETHYL-THPP 2-ALPHA-HYDROXYETHYL-THPP] == * common-name: ** 2-(α-hydroxyeth...")
(Created page with "Category:gene == Gene SJ05715 == * transcription-direction: ** negative * right-end-position: ** 41664 * left-end-position: ** 36946 * centisome-position: ** 41.4667 =...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-ALPHA-HYDROXYETHYL-THPP 2-ALPHA-HYDROXYETHYL-THPP] ==
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== Gene SJ05715 ==
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* common-name:
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* transcription-direction:
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** 2-(α-hydroxyethyl)thiamine diphosphate
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** negative
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* smiles:
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* right-end-position:
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** cc2(=c(sc(c(c)o)=[n+](cc1(c=nc(c)=nc(n)=1))2)ccop(=o)([o-])op(=o)([o-])[o-])
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** 41664
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* inchi-key:
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* left-end-position:
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** rruvjgasjonmdy-uhfffaoysa-l
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** 36946
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* molecular-weight:
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* centisome-position:
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** 466.341
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** 41.4667   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[PDHam2hi]]
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* [[S.japonica_sterols_curated]]
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* [[PDHam2mi]]
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== Reaction(s) associated ==
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* [[RXN-12508]]
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* [[NADH-DEHYDROG-A-RXN]]
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* [[RXN-14037]]
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** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12583]]
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** Category: [[orthology]]
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* [[RXN-14037]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[NADH-DEHYDROGENASE-QUINONE-RXN]]
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{{#set: common-name=2-(α-hydroxyethyl)thiamine diphosphate}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=rruvjgasjonmdy-uhfffaoysa-l}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=466.341}}
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* [[NADH-DEHYDROGENASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5330]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY0-1335]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-4302]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-3781]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY0-1334]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6692]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5083]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7279]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY0-1573]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7269]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY0-1568]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY0-1567]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=41664}}
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{{#set: left-end-position=36946}}
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{{#set: centisome-position=41.4667    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=4}}
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{{#set: nb pathway associated=11}}

Revision as of 20:21, 18 December 2020

Gene SJ05715

  • transcription-direction:
    • negative
  • right-end-position:
    • 41664
  • left-end-position:
    • 36946
  • centisome-position:
    • 41.4667

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1335
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-4302
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-3781
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1334
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6692
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7279
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1573
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7269
    • 5 reactions found over 5 reactions in the full pathway
  • PWY0-1568
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1567
    • 1 reactions found over 2 reactions in the full pathway




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