Difference between revisions of "SJ18438"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=TRANS-3-METHYL-GLUTACONYL-COA TRANS-3-METHYL-GLUTACONYL-COA] == * common-name: ** 3-methylgluta...")
(Created page with "Category:gene == Gene SJ19420 == * transcription-direction: ** positive * right-end-position: ** 201566 * left-end-position: ** 193929 * centisome-position: ** 85.32753...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=TRANS-3-METHYL-GLUTACONYL-COA TRANS-3-METHYL-GLUTACONYL-COA] ==
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== Gene SJ19420 ==
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* common-name:
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* transcription-direction:
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** 3-methylglutaconyl-coa
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** positive
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* smiles:
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* right-end-position:
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** cc(=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])cc(=o)[o-]
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** 201566
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* inchi-key:
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* left-end-position:
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** gxkshrdahflwpn-rkylshmcsa-i
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** 193929
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* molecular-weight:
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* centisome-position:
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** 888.606
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** 85.32753   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_sterols_curated]]
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* [[METHYLCROTONYL-COA-CARBOXYLASE-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[2.7.10.1-RXN]]
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{{#set: common-name=3-methylglutaconyl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=gxkshrdahflwpn-rkylshmcsa-i}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=888.606}}
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* [[2.7.12.1-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PROTEIN-KINASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-14906]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-8443]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-5381]]
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** '''6''' reactions found over '''11''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=201566}}
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{{#set: left-end-position=193929}}
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{{#set: centisome-position=85.32753    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=1}}

Revision as of 20:21, 18 December 2020

Gene SJ19420

  • transcription-direction:
    • positive
  • right-end-position:
    • 201566
  • left-end-position:
    • 193929
  • centisome-position:
    • 85.32753

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18438&oldid=41468"