Difference between revisions of "SJ20061"

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(Created page with "Category:gene == Gene SJ12778 == * transcription-direction: ** positive * right-end-position: ** 63127 * left-end-position: ** 52326 * centisome-position: ** 13.607675...")
(Created page with "Category:gene == Gene SJ16894 == * transcription-direction: ** positive * right-end-position: ** 265481 * left-end-position: ** 249445 * centisome-position: ** 90.47992...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ12778 ==
+
== Gene SJ16894 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 63127
+
** 265481
 
* left-end-position:
 
* left-end-position:
** 52326
+
** 249445
 
* centisome-position:
 
* centisome-position:
** 13.607675    
+
** 90.47992    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[3-DEHYDROSPHINGANINE-REDUCTASE-RXN]]
+
* [[UGD-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[UGDH]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* [[RXN-12642]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12645]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[SPHINGOLIPID-SYN-PWY]]
+
* [[PWY-7346]]
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
* [[PWY-5129]]
+
* [[PWY-7820]]
** '''4''' reactions found over '''13''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
* [[PWY3DJ-12]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=63127}}
+
{{#set: right-end-position=265481}}
{{#set: left-end-position=52326}}
+
{{#set: left-end-position=249445}}
{{#set: centisome-position=13.607675   }}
+
{{#set: centisome-position=90.47992   }}
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=2}}

Revision as of 20:22, 18 December 2020

Gene SJ16894

  • transcription-direction:
    • positive
  • right-end-position:
    • 265481
  • left-end-position:
    • 249445
  • centisome-position:
    • 90.47992

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7346
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7820
    • 2 reactions found over 9 reactions in the full pathway