Difference between revisions of "SJ21183"
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(Created page with "Category:gene == Gene SJ03200 == * transcription-direction: ** negative * right-end-position: ** 89192 * left-end-position: ** 73674 * centisome-position: ** 59.42506...") |
(Created page with "Category:gene == Gene SJ13300 == * transcription-direction: ** negative * right-end-position: ** 180413 * left-end-position: ** 155939 * centisome-position: ** 45.459686...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ13300 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 180413 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 155939 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 45.459686 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_sterols_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[SERINE-C-PALMITOYLTRANSFERASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY | + | * [[PWY3DJ-12]] |
− | ** ''' | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
− | * [[PWY- | + | * [[SPHINGOLIPID-SYN-PWY]] |
− | ** '''4''' reactions found over ''' | + | ** '''4''' reactions found over '''11''' reactions in the full pathway |
+ | * [[PWY-5129]] | ||
+ | ** '''4''' reactions found over '''13''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=180413}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=155939}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=45.459686 }} |
− | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_sterols_curated}} |
{{#set: nb reaction associated=1}} | {{#set: nb reaction associated=1}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 20:27, 18 December 2020
Contents
Gene SJ13300
- transcription-direction:
- negative
- right-end-position:
- 180413
- left-end-position:
- 155939
- centisome-position:
- 45.459686
Organism(s) associated with this gene
Reaction(s) associated
- SERINE-C-PALMITOYLTRANSFERASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY3DJ-12
- 2 reactions found over 4 reactions in the full pathway
- SPHINGOLIPID-SYN-PWY
- 4 reactions found over 11 reactions in the full pathway
- PWY-5129
- 4 reactions found over 13 reactions in the full pathway