Difference between revisions of "SJ02109"

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(Created page with "Category:gene == Gene SJ17025 == * transcription-direction: ** negative * right-end-position: ** 75461 * left-end-position: ** 47125 * centisome-position: ** 17.306025...")
(Created page with "Category:gene == Gene SJ22154 == * transcription-direction: ** positive * right-end-position: ** 151331 * left-end-position: ** 132638 * centisome-position: ** 73.6395...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ17025 ==
+
== Gene SJ22154 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 75461
+
** 151331
 
* left-end-position:
 
* left-end-position:
** 47125
+
** 132638
 
* centisome-position:
 
* centisome-position:
** 17.306025    
+
** 73.6395    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.4.22.40-RXN]]
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[PHENOL-BETA-GLUCOSYLTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN1G-1435]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN1G-1436]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN1G-1437]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN1G-1438]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN1G-1439]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[TREHALOSE6PSYN-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[TREHALOSEPHOSPHA-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
</div>
+
{{#set: transcription-direction=positive}}
== Pathway(s) associated ==
+
{{#set: right-end-position=151331}}
* [[PWYG-321]]
+
{{#set: left-end-position=132638}}
** '''26''' reactions found over '''182''' reactions in the full pathway
+
{{#set: centisome-position=73.6395   }}
* [[TRESYN-PWY]]
+
{{#set: organism associated=S.japonica_sterols_curated}}
** '''2''' reactions found over '''2''' reactions in the full pathway
+
{{#set: nb reaction associated=1}}
* [[PWY-7900]]
 
** '''2''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-881]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[TREHALOSESYN-PWY]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=75461}}
 
{{#set: left-end-position=47125}}
 
{{#set: centisome-position=17.306025   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=9}}
 
{{#set: nb pathway associated=5}}
 

Revision as of 20:29, 18 December 2020

Gene SJ22154

  • transcription-direction:
    • positive
  • right-end-position:
    • 151331
  • left-end-position:
    • 132638
  • centisome-position:
    • 73.6395

Organism(s) associated with this gene

Reaction(s) associated