Difference between revisions of "UDP-L-ARABINOSE"

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(Created page with "Category:gene == Gene SJ06077 == * transcription-direction: ** positive * right-end-position: ** 59209 * left-end-position: ** 56608 * centisome-position: ** 67.384056...")
(Created page with "Category:metabolite == Metabolite CPD-71 == * common-name: ** (25r)-3α,7α,12α-trihydroxy-5β-cholestanoyl-coa * smiles: ** cc(cccc(c)c(sccnc(=o)ccnc(...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ06077 ==
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== Metabolite CPD-71 ==
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* transcription-direction:
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* common-name:
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** positive
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** (25r)-3α,7α,12α-trihydroxy-5β-cholestanoyl-coa
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* right-end-position:
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* smiles:
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** 59209
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** cc(cccc(c)c(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o)[ch]4(cc[ch]5(c(c)4c(o)c[ch]6([ch]5c(o)c[ch]7(c(c)6ccc(o)c7))))
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* left-end-position:
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* inchi-key:
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** 56608
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** mnydliunnocphg-fjwdchqmsa-j
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* centisome-position:
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* molecular-weight:
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** 67.384056   
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** 1196.145
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[1.17.99.3-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[ATPASE-RXN]]
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* [[1.17.99.3-RXN]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=(25r)-3α,7α,12α-trihydroxy-5β-cholestanoyl-coa}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: inchi-key=inchikey=mnydliunnocphg-fjwdchqmsa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=1196.145}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12195]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12196]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=59209}}
 
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{{#set: left-end-position=56608}}
 
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{{#set: centisome-position=67.384056    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=4}}
 

Revision as of 20:33, 18 December 2020

Metabolite CPD-71

  • common-name:
    • (25r)-3α,7α,12α-trihydroxy-5β-cholestanoyl-coa
  • smiles:
    • cc(cccc(c)c(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o)[ch]4(cc[ch]5(c(c)4c(o)c[ch]6([ch]5c(o)c[ch]7(c(c)6ccc(o)c7))))
  • inchi-key:
    • mnydliunnocphg-fjwdchqmsa-j
  • molecular-weight:
    • 1196.145

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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