Difference between revisions of "GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Protein"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-949 RXN0-949] == * direction: ** left-to-right * common-name: ** lipoyl synthase * ec-number:...")
(Created page with "Category:metabolite == Metabolite PRENAL == * common-name: ** 3-methyl-2-butenal * smiles: ** cc(=c[ch]=o)c * inchi-key: ** sepqtyodoklvsb-uhfffaoysa-n * molecular-weight:...")
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-949 RXN0-949] ==
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== Metabolite PRENAL ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** lipoyl synthase
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** 3-methyl-2-butenal
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/2.8.1.8 ec-2.8.1.8]
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** cc(=c[ch]=o)c
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== Reaction formula ==
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* inchi-key:
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* 1 [[Octanoylated-domains]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 2 [[Sulfurated-Sulfur-Acceptors]][c] '''=>''' 2 [[CH33ADO]][c] '''+''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c] '''+''' 2 [[MET]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[Unsulfurated-Sulfur-Acceptors]][c]
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** sepqtyodoklvsb-uhfffaoysa-n
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ03663]]
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** 84.118
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[1.5.99.12-RXN]]
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* Gene: [[SJ04393]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[1.5.99.12-RXN]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[1.8.3.5-RXN]]
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* Gene: [[SJ11692]]
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* [[RXN-11989]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: common-name=3-methyl-2-butenal}}
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== Pathway(s) ==
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{{#set: inchi-key=inchikey=sepqtyodoklvsb-uhfffaoysa-n}}
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* [[PWY0-1275]], lipoate biosynthesis and incorporation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1275 PWY0-1275]
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{{#set: molecular-weight=84.118}}
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY0-501]], lipoate biosynthesis and incorporation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-501 PWY0-501]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-6987]], lipoate biosynthesis and incorporation III (Bacillus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6987 PWY-6987]
 
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** '''2''' reactions found over '''3''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16586 16586]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R07767 R07767]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=lipoyl synthase}}
 
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{{#set: ec-number=ec-2.8.1.8}}
 
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{{#set: nb gene associated=3}}
 
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{{#set: nb pathway associated=3}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 20:34, 18 December 2020

Metabolite PRENAL

  • common-name:
    • 3-methyl-2-butenal
  • smiles:
    • cc(=c[ch]=o)c
  • inchi-key:
    • sepqtyodoklvsb-uhfffaoysa-n
  • molecular-weight:
    • 84.118

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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