Difference between revisions of "Cleaved-type-1-transmembrane-domains"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13302 RXN-13302] == * direction: ** left-to-right * common-name: ** 3-hydroxy-arachidoyl-coa de...")
(Created page with "Category:metabolite == Metabolite CPD0-934 == * common-name: ** glucosyl-(heptosyl)3-kdo2-lipid a-phosphate * smiles: ** cccccccccccccc(=o)oc(cc(oc2(c(c(occ1(oc(op([o-])(=...")
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13302 RXN-13302] ==
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== Metabolite CPD0-934 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** 3-hydroxy-arachidoyl-coa dehydratase
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** glucosyl-(heptosyl)3-kdo2-lipid a-phosphate
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134]
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** cccccccccccccc(=o)oc(cc(oc2(c(c(occ1(oc(op([o-])(=o)[o-])c(nc(=o)cc(o)ccccccccccc)c(oc(=o)cc(o)ccccccccccc)c(o)1))oc(c2op([o-])([o-])=o)coc8(c([o-])=o)(oc(c(o)co)c(oc6(oc(c(co)o)c(c(oc5(oc(c(coc3(oc(c(co)o)c(c(o)c3o)o))o)c(c(oc4(c(c(c(c(co)o4)o)o)o))c5o)o))c6o)op([o-])(=o)[o-]))c(oc7(c(=o)[o-])(oc(c(o)co)c(o)c(o)c7))c8))nc(cc(ccccccccccc)oc(ccccccccccc)=o)=o))=o)ccccccccccc
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== Reaction formula ==
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* inchi-key:
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* 1 [[CPD-14275]][c] '''=>''' 1 [[CPD-14280]][c] '''+''' 1 [[WATER]][c]
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** qhkuhequrqlsfa-jyysnnmzsa-f
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ00783]]
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** 3049.306
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-14361]]
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* Gene: [[SJ06882]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: common-name=glucosyl-(heptosyl)3-kdo2-lipid a-phosphate}}
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== Pathway(s) ==
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{{#set: inchi-key=inchikey=qhkuhequrqlsfa-jyysnnmzsa-f}}
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* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036]
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{{#set: molecular-weight=3049.306}}
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** '''14''' reactions found over '''16''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=3-hydroxy-arachidoyl-coa dehydratase}}
 
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{{#set: ec-number=ec-4.2.1.134}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 20:36, 18 December 2020

Metabolite CPD0-934

  • common-name:
    • glucosyl-(heptosyl)3-kdo2-lipid a-phosphate
  • smiles:
    • cccccccccccccc(=o)oc(cc(oc2(c(c(occ1(oc(op([o-])(=o)[o-])c(nc(=o)cc(o)ccccccccccc)c(oc(=o)cc(o)ccccccccccc)c(o)1))oc(c2op([o-])([o-])=o)coc8(c([o-])=o)(oc(c(o)co)c(oc6(oc(c(co)o)c(c(oc5(oc(c(coc3(oc(c(co)o)c(c(o)c3o)o))o)c(c(oc4(c(c(c(c(co)o4)o)o)o))c5o)o))c6o)op([o-])(=o)[o-]))c(oc7(c(=o)[o-])(oc(c(o)co)c(o)c(o)c7))c8))nc(cc(ccccccccccc)oc(ccccccccccc)=o)=o))=o)ccccccccccc
  • inchi-key:
    • qhkuhequrqlsfa-jyysnnmzsa-f
  • molecular-weight:
    • 3049.306

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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