Difference between revisions of "CPD-10353"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISPH2-RXN ISPH2-RXN] == * direction: ** left-to-right * common-name: ** isopentenyl-diphosphate:nad...")
(Created page with "Category:metabolite == Metabolite CPD-31 == * common-name: ** (r)-citramalate * smiles: ** cc(o)(c(=o)[o-])cc(=o)[o-] * inchi-key: ** xftrtwqbiomvpk-rxmqykedsa-l * molecul...")
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISPH2-RXN ISPH2-RXN] ==
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== Metabolite CPD-31 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** isopentenyl-diphosphate:nad(p)+ oxidoreductase
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** (r)-citramalate
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/1.17.7.4 ec-1.17.7.4]
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** cc(o)(c(=o)[o-])cc(=o)[o-]
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== Reaction formula ==
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* inchi-key:
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* 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
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** xftrtwqbiomvpk-rxmqykedsa-l
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ04795]]
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** 146.099
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[R-2-METHYLMALATE-DEHYDRATASE-RXN]]
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** Category: [[orthology]]
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== Reaction(s) known to produce the compound ==
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[R-2-METHYLMALATE-DEHYDRATASE-RXN]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reaction(s) of unknown directionality ==
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== Pathway(s) ==
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{{#set: common-name=(r)-citramalate}}
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* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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{{#set: inchi-key=inchikey=xftrtwqbiomvpk-rxmqykedsa-l}}
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: molecular-weight=146.099}}
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* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24490 24490]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R08209 R08209]
 
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** [http://www.genome.jp/dbget-bin/www_bget?R05884 R05884]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=isopentenyl-diphosphate:nad(p)+ oxidoreductase}}
 
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{{#set: ec-number=ec-1.17.7.4}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}
 

Revision as of 20:36, 18 December 2020

Metabolite CPD-31

  • common-name:
    • (r)-citramalate
  • smiles:
    • cc(o)(c(=o)[o-])cc(=o)[o-]
  • inchi-key:
    • xftrtwqbiomvpk-rxmqykedsa-l
  • molecular-weight:
    • 146.099

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-10353&oldid=47895"