Difference between revisions of "RXN-16415"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMETt2h AMETt2h] == * direction: ** reversible * common-name: ** s-adenosyl-l-methionine reversible...") |
(Created page with "Category:reaction == Reaction 2.7.7.15-RXN == * direction: ** left-to-right * common-name: ** choline-phosphate cytidylyltransferase * ec-number: ** [http://enzyme.expasy....") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction 2.7.7.15-RXN == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
− | ** | + | ** choline-phosphate cytidylyltransferase |
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.7.7.15 ec-2.7.7.15] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[CTP]][c] '''+''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CDP-CHOLINE]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ19268]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-7886]], cell-surface glycoconjugate-linked phosphocholine biosynthesis: | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY3O-450]], phosphatidylcholine biosynthesis I: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-3561]], choline biosynthesis III: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-7818]], type IV lipoteichoic acid biosynthesis (S. pneumoniae): | ||
+ | ** '''2''' reactions found over '''19''' reactions in the full pathway | ||
+ | * [[PWY4FS-2]], phosphatidylcholine biosynthesis II: | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7782]], plasmalogen biosynthesis: | ||
+ | ** '''11''' reactions found over '''16''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: common-name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18998 18998] |
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01890 R01890] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P19836 P19836] | ||
+ | ** [http://www.uniprot.org/uniprot/P49586 P49586] | ||
+ | ** [http://www.uniprot.org/uniprot/P49584 P49584] | ||
+ | ** [http://www.uniprot.org/uniprot/P49585 P49585] | ||
+ | ** [http://www.uniprot.org/uniprot/P49587 P49587] | ||
+ | ** [http://www.uniprot.org/uniprot/P93470 P93470] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42619 Q42619] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42620 Q42620] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42621 Q42621] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42622 Q42622] | ||
+ | ** [http://www.uniprot.org/uniprot/P13259 P13259] | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=choline-phosphate cytidylyltransferase}} | ||
+ | {{#set: ec-number=ec-2.7.7.15}} | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
− | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}} |
Revision as of 20:38, 18 December 2020
Contents
Reaction 2.7.7.15-RXN
- direction:
- left-to-right
- common-name:
- choline-phosphate cytidylyltransferase
- ec-number:
Reaction formula
- 1 CTP[c] + 1 PHOSPHORYL-CHOLINE[c] + 1 PROTON[c] => 1 CDP-CHOLINE[c] + 1 PPI[c]
Gene(s) associated with this reaction
- Gene: SJ19268
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7886, cell-surface glycoconjugate-linked phosphocholine biosynthesis:
- 2 reactions found over 3 reactions in the full pathway
- PWY3O-450, phosphatidylcholine biosynthesis I:
- 3 reactions found over 3 reactions in the full pathway
- PWY-3561, choline biosynthesis III:
- 3 reactions found over 3 reactions in the full pathway
- PWY-7818, type IV lipoteichoic acid biosynthesis (S. pneumoniae):
- 2 reactions found over 19 reactions in the full pathway
- PWY4FS-2, phosphatidylcholine biosynthesis II:
- 2 reactions found over 5 reactions in the full pathway
- PWY-7782, plasmalogen biosynthesis:
- 11 reactions found over 16 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: