Difference between revisions of "RXN-4313-CPD-4205/WATER//CPD-15318/CPD-4209.35."

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4401 RXN0-4401] == * direction: ** left-to-right * common-name: ** nadh pyrophosphatase ** nad...")
(Created page with "Category:reaction == Reaction NITRITE-REDUCTASE-CYTOCHROME-RXN == * direction: ** left-to-right * common-name: ** nitrite reductase (no-forming) * ec-number: ** [http://en...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4401 RXN0-4401] ==
+
== Reaction NITRITE-REDUCTASE-CYTOCHROME-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nadh pyrophosphatase
+
** nitrite reductase (no-forming)
−
** nad+ diphosphatase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.1.22 ec-3.6.1.22]
+
** [http://enzyme.expasy.org/EC/1.7.2.1 ec-1.7.2.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADH]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[NMNH]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[Cytochromes-C-Reduced]][c] '''+''' 1 [[NITRITE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[Cytochromes-C-Oxidized]][c] '''+''' 1 [[NITRIC-OXIDE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19893]]
+
* Gene: [[SJ15937]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ22529]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ19894]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[P303-PWY]], ammonia oxidation II (anaerobic):
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6748]], nitrate reduction VII (denitrification):
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6523]], nitrite-dependent anaerobic methane oxidation:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7084]], nitrifier denitrification:
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* LIGAND-RXN:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=48869 48869]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00783 R00783]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q06006 Q06006]
 +
** [http://www.uniprot.org/uniprot/Q52519 Q52519]
 +
** [http://www.uniprot.org/uniprot/P24474 P24474]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nadh pyrophosphatase|nad+ diphosphatase}}
+
{{#set: common-name=nitrite reductase (no-forming)}}
−
{{#set: ec-number=ec-3.6.1.22}}
+
{{#set: ec-number=ec-1.7.2.1}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:39, 18 December 2020

Reaction NITRITE-REDUCTASE-CYTOCHROME-RXN

  • direction:
    • left-to-right
  • common-name:
    • nitrite reductase (no-forming)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • P303-PWY, ammonia oxidation II (anaerobic):
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6748, nitrate reduction VII (denitrification):
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6523, nitrite-dependent anaerobic methane oxidation:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7084, nitrifier denitrification:
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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