Difference between revisions of "2.7.7.1-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.24.64-RXN 3.4.24.64-RXN] == * direction: ** left-to-right * common-name: ** mitochondrial-proce...")
(Created page with "Category:reaction == Reaction RXN-701 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.8.1 ec-1.8.1] == Reaction formula == * 1 NADPH[c] ''...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.24.64-RXN 3.4.24.64-RXN] ==
+
== Reaction RXN-701 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** mitochondrial-processing peptidase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.4.24.64 ec-3.4.24.64]
+
** [http://enzyme.expasy.org/EC/1.8.1 ec-1.8.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Mitochondrial-Preproteins]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MPP-processed-mitochonrial-proteins]][c] '''+''' 1 [[Peptides-holder]][c]
+
* 1 [[NADPH]][c] '''+''' 1 [[PAPS]][c] '''<=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SO3]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13715]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09586]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08789]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13651]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P11913 P11913]
+
{{#set: ec-number=ec-1.8.1}}
−
** [http://www.uniprot.org/uniprot/P20069 P20069]
+
{{#set: nb gene associated=0}}
−
** [http://www.uniprot.org/uniprot/P23955 P23955]
 
−
** [http://www.uniprot.org/uniprot/Q9T2S9 Q9T2S9]
 
−
** [http://www.uniprot.org/uniprot/Q9T2S8 Q9T2S8]
 
−
** [http://www.uniprot.org/uniprot/P10507 P10507]
 
−
** [http://www.uniprot.org/uniprot/P29677 P29677]
 
−
** [http://www.uniprot.org/uniprot/Q03346 Q03346]
 
−
** [http://www.uniprot.org/uniprot/Q41440 Q41440]
 
−
** [http://www.uniprot.org/uniprot/Q9UG64 Q9UG64]
 
−
** [http://www.uniprot.org/uniprot/Q9P7X1 Q9P7X1]
 
−
** [http://www.uniprot.org/uniprot/P11914 P11914]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=mitochondrial-processing peptidase}}
 
−
{{#set: ec-number=ec-3.4.24.64}}
 
−
{{#set: nb gene associated=4}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Revision as of 20:40, 18 December 2020

Reaction RXN-701

  • direction:
    • reversible
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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