Difference between revisions of "TRANS-RXN0-460"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13641 RXN-13641] == * direction: ** reversible * common-name: ** β-carotene isomerase * ec...")
(Created page with "Category:reaction == Reaction RXN-12583 == * direction: ** left-to-right * common-name: ** pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating) ** pyruva...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13641 RXN-13641] ==
+
== Reaction RXN-12583 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** β-carotene isomerase
+
** pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)
−
* ec-number:
+
** pyruvate dehydrogenase (nad+)
−
** [http://enzyme.expasy.org/EC/5.2.1.14 ec-5.2.1.14]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD1F-129]][c] '''<=>''' 1 [[CPD-14646]][c]
+
* 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[THIAMINE-PYROPHOSPHATE]][c] '''=>''' 1 [[2-ALPHA-HYDROXYETHYL-THPP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06689]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ14925]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ20376]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19470]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ18022]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ09312]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ00971]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ01042]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7101]], 5-deoxystrigol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7101 PWY-7101]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R10282 R10282]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00014 R00014]
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34458 34458]
+
{{#set: common-name=pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)|pyruvate dehydrogenase (nad+)}}
−
{{#set: direction=reversible}}
+
{{#set: nb gene associated=5}}
−
{{#set: common-name=&beta;-carotene isomerase}}
+
{{#set: nb pathway associated=0}}
−
{{#set: ec-number=ec-5.2.1.14}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: nb gene associated=3}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:40, 18 December 2020

Reaction RXN-12583

  • direction:
    • left-to-right
  • common-name:
    • pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)
    • pyruvate dehydrogenase (nad+)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=TRANS-RXN0-460&oldid=49513"