Difference between revisions of "RXN-16044"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12460 RXN-12460] == * direction: ** left-to-right * common-name: ** l-asparaginyl-trnaasn hydro...")
(Created page with "Category:reaction == Reaction 2.1.1.77-RXN == * direction: ** left-to-right * common-name: ** l-isoaspartate protein carboxylmethyltransferase ** protein-l-isoaspartate (d...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12460 RXN-12460] ==
+
== Reaction 2.1.1.77-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** l-asparaginyl-trnaasn hydrolase
+
** l-isoaspartate protein carboxylmethyltransferase
−
** aminoacyl-trna hydrolase
+
** protein-l-isoaspartate (d-aspartate) o-methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.1.29 ec-3.1.1.29]
+
** [http://enzyme.expasy.org/EC/2.1.1.77 ec-2.1.1.77]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ASN]][c] '''+''' 1 [[ASN-tRNAs]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[PROTEIN-L-BETA-ISOASPARTATES]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTEIN-L-BETA-ISOSPARTATE-METHYL-ESTERS]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ06126]]
−
* Gene: [[SJ09079]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ05960]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ00680]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ02121]]
+
* Gene: [[SJ01013]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03879]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-4 PWY490-4]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12706 12706]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04190 R04190]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P22062 P22062]
 +
** [http://www.uniprot.org/uniprot/P22061 P22061]
 +
** [http://www.uniprot.org/uniprot/P15246 P15246]
 +
** [http://www.uniprot.org/uniprot/Q9JW29 Q9JW29]
 +
** [http://www.uniprot.org/uniprot/Q9PIR6 Q9PIR6]
 +
** [http://www.uniprot.org/uniprot/P23506 P23506]
 +
** [http://www.uniprot.org/uniprot/P0A7A5 P0A7A5]
 +
** [http://www.uniprot.org/uniprot/Q43209 Q43209]
 +
** [http://www.uniprot.org/uniprot/Q42539 Q42539]
 +
** [http://www.uniprot.org/uniprot/Q27873 Q27873]
 +
** [http://www.uniprot.org/uniprot/Q9URZ1 Q9URZ1]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=aminoacyl-trna hydrolase|l-asparaginyl-trnaasn hydrolase}}
+
{{#set: common-name=l-isoaspartate protein carboxylmethyltransferase|protein-l-isoaspartate (d-aspartate) o-methyltransferase}}
−
{{#set: ec-number=ec-3.1.1.29}}
+
{{#set: ec-number=ec-2.1.1.77}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:40, 18 December 2020

Reaction 2.1.1.77-RXN

  • direction:
    • left-to-right
  • common-name:
    • l-isoaspartate protein carboxylmethyltransferase
    • protein-l-isoaspartate (d-aspartate) o-methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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