Difference between revisions of "RXN-17518"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4261 PWY-4261] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-21...") |
(Created page with "Category:reaction == Reaction RXN-12400 == * direction: ** left-to-right * common-name: ** xyloglucan xllg oligosaccharide β-galactosidase ** beta-galactosidase ** xl...") |
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| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:reaction]] |
| − | == | + | == Reaction RXN-12400 == |
| − | * | + | * direction: |
| − | ** | + | ** left-to-right |
| − | |||
| − | |||
| − | |||
* common-name: | * common-name: | ||
| − | ** | + | ** xyloglucan xllg oligosaccharide β-galactosidase |
| − | == Reaction(s) | + | ** beta-galactosidase |
| − | * [[ | + | ** xllg xyloglucan oligosaccharide β-galactosidase |
| − | * [[ | + | * ec-number: |
| − | == | + | ** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3.2.1.23] |
| − | + | == Reaction formula == | |
| − | {{#set: | + | * 1 [[CPD-13378]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[CPD-13375]][c] '''+''' 2 [[D-galactopyranose]][c] |
| − | {{#set: | + | == Gene(s) associated with this reaction == |
| − | {{#set: nb | + | * Gene: [[SJ14193]] |
| − | {{#set: | + | ** Category: [[annotation]] |
| − | {{#set: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
| + | * Gene: [[SJ04558]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
| + | * Gene: [[SJ10277]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ03139]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | == Pathway(s) == | ||
| + | * [[PWY-6807]], xyloglucan degradation II (exoglucanase): | ||
| + | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == External links == | ||
| + | {{#set: direction=left-to-right}} | ||
| + | {{#set: common-name=xyloglucan xllg oligosaccharide β-galactosidase|beta-galactosidase|xllg xyloglucan oligosaccharide β-galactosidase}} | ||
| + | {{#set: ec-number=ec-3.2.1.23}} | ||
| + | {{#set: nb gene associated=4}} | ||
| + | {{#set: nb pathway associated=1}} | ||
| + | {{#set: reconstruction category=annotation|orthology}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
| + | {{#set: reconstruction comment=n.a}} | ||
| + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | ||
Revision as of 20:42, 18 December 2020
Contents
Reaction RXN-12400
- direction:
- left-to-right
- common-name:
- xyloglucan xllg oligosaccharide β-galactosidase
- beta-galactosidase
- xllg xyloglucan oligosaccharide β-galactosidase
- ec-number:
Reaction formula
- 1 CPD-13378[c] + 2 WATER[c] => 1 CPD-13375[c] + 2 D-galactopyranose[c]
Gene(s) associated with this reaction
- Gene: SJ14193
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ04558
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ10277
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ03139
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6807, xyloglucan degradation II (exoglucanase):
- 3 reactions found over 8 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
