Difference between revisions of "GCVT-RXN"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5196 PWY-5196] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-224756 tax-...") |
(Created page with "Category:reaction == Reaction GSAAMINOTRANS-RXN == * direction: ** left-to-right * common-name: ** glutamate-1-semialdehyde aminotransferase * ec-number: ** [http://enzyme...") |
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− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction GSAAMINOTRANS-RXN == |
− | + | * direction: | |
− | + | ** left-to-right | |
− | * | ||
− | ** | ||
* common-name: | * common-name: | ||
− | ** | + | ** glutamate-1-semialdehyde aminotransferase |
− | == Reaction(s) | + | * ec-number: |
− | * [[ | + | ** [http://enzyme.expasy.org/EC/5.4.3.8 ec-5.4.3.8] |
− | * [[ | + | == Reaction formula == |
− | * [[ | + | * 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''=>''' 1 [[5-AMINO-LEVULINATE]][c] |
− | == | + | == Gene(s) associated with this reaction == |
− | * [http:// | + | * Gene: [[SJ13978]] |
− | * [http:// | + | ** Category: [[annotation]] |
− | * [http:// | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | * [http:// | + | ** Category: [[orthology]] |
− | {{#set: | + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | {{#set: | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | {{#set: nb | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | {{#set: | + | == Pathway(s) == |
− | {{#set: | + | * [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): |
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14265 14265] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R02272 R02272] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P18492 P18492] | ||
+ | ** [http://www.uniprot.org/uniprot/P21267 P21267] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06741 Q06741] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06774 Q06774] | ||
+ | ** [http://www.uniprot.org/uniprot/P23893 P23893] | ||
+ | ** [http://www.uniprot.org/uniprot/O26330 O26330] | ||
+ | ** [http://www.uniprot.org/uniprot/P30949 P30949] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PP70 Q9PP70] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JW10 Q9JW10] | ||
+ | ** [http://www.uniprot.org/uniprot/O29027 O29027] | ||
+ | ** [http://www.uniprot.org/uniprot/P45621 P45621] | ||
+ | ** [http://www.uniprot.org/uniprot/P24630 P24630] | ||
+ | ** [http://www.uniprot.org/uniprot/P31593 P31593] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39566 Q39566] | ||
+ | ** [http://www.uniprot.org/uniprot/P48247 P48247] | ||
+ | ** [http://www.uniprot.org/uniprot/P46716 P46716] | ||
+ | ** [http://www.uniprot.org/uniprot/Q40147 Q40147] | ||
+ | ** [http://www.uniprot.org/uniprot/O74061 O74061] | ||
+ | </div> | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=glutamate-1-semialdehyde aminotransferase}} | ||
+ | {{#set: ec-number=ec-5.4.3.8}} | ||
+ | {{#set: nb gene associated=1}} | ||
+ | {{#set: nb pathway associated=1}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}} |
Revision as of 20:44, 18 December 2020
Contents
Reaction GSAAMINOTRANS-RXN
- direction:
- left-to-right
- common-name:
- glutamate-1-semialdehyde aminotransferase
- ec-number:
Reaction formula
- 1 GLUTAMATE-1-SEMIALDEHYDE[c] => 1 5-AMINO-LEVULINATE[c]
Gene(s) associated with this reaction
- Gene: SJ13978
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5188, tetrapyrrole biosynthesis I (from glutamate):
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links