Difference between revisions of "SUCCINYLDIAMINOPIMTRANS-RXN"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5406 PWY-5406] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-3...") |
(Created page with "Category:reaction == Reaction THIOREDOXIN-REDUCT-NADPH-RXN == * direction: ** left-to-right * common-name: ** thioredoxin-disulfide reductase ** thioredoxin reductase * ec...") |
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− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction THIOREDOXIN-REDUCT-NADPH-RXN == |
− | * | + | * direction: |
− | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
− | ** | + | ** thioredoxin-disulfide reductase |
− | == Reaction(s) | + | ** thioredoxin reductase |
− | * [[ | + | * ec-number: |
− | == | + | ** [http://enzyme.expasy.org/EC/1.8.1.9 ec-1.8.1.9] |
− | * [http:// | + | == Reaction formula == |
− | * [http:// | + | * 1 [[NADPH]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Red-Thioredoxin]][c] |
− | * [http:// | + | == Gene(s) associated with this reaction == |
− | {{#set: | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: | + | * Gene: [[SJ16329]] |
− | {{#set: nb | + | ** Category: [[orthology]] |
− | {{#set: | + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | {{#set: | + | * Gene: [[SJ21344]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ00293]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ08960]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ00760]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ04991]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ00931]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ16658]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ06874]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ01778]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ09093]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ12278]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ21339]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
+ | == Pathway(s) == | ||
+ | * [[THIOREDOX-PWY]], thioredoxin pathway: | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20345 20345] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R02016 R02016] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q05741 Q05741] | ||
+ | ** [http://www.uniprot.org/uniprot/P56431 P56431] | ||
+ | ** [http://www.uniprot.org/uniprot/O28718 O28718] | ||
+ | ** [http://www.uniprot.org/uniprot/P80880 P80880] | ||
+ | ** [http://www.uniprot.org/uniprot/P43496 P43496] | ||
+ | ** [http://www.uniprot.org/uniprot/P94284 P94284] | ||
+ | ** [http://www.uniprot.org/uniprot/O66790 O66790] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PIY1 Q9PIY1] | ||
+ | ** [http://www.uniprot.org/uniprot/P47348 P47348] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CH02 Q9CH02] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M0Y2 Q7M0Y2] | ||
+ | ** [http://www.uniprot.org/uniprot/O26804 O26804] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JU23 Q9JU23] | ||
+ | ** [http://www.uniprot.org/uniprot/P43788 P43788] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58931 Q58931] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CF34 Q9CF34] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A9P4 P0A9P4] | ||
+ | ** [http://www.uniprot.org/uniprot/P23160 P23160] | ||
+ | ** [http://www.uniprot.org/uniprot/P39916 P39916] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39242 Q39242] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39243 Q39243] | ||
+ | ** [http://www.uniprot.org/uniprot/P38816 P38816] | ||
+ | ** [http://www.uniprot.org/uniprot/Q25861 Q25861] | ||
+ | ** [http://www.uniprot.org/uniprot/P29509 P29509] | ||
+ | ** [http://www.uniprot.org/uniprot/P52213 P52213] | ||
+ | ** [http://www.uniprot.org/uniprot/Q16881 Q16881] | ||
+ | ** [http://www.uniprot.org/uniprot/P75531 P75531] | ||
+ | ** [http://www.uniprot.org/uniprot/P74746 P74746] | ||
+ | ** [http://www.uniprot.org/uniprot/P46843 P46843] | ||
+ | ** [http://www.uniprot.org/uniprot/O54535 O54535] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39951 Q39951] | ||
+ | ** [http://www.uniprot.org/uniprot/Q92375 Q92375] | ||
+ | ** [http://www.uniprot.org/uniprot/P52215 P52215] | ||
+ | ** [http://www.uniprot.org/uniprot/P51978 P51978] | ||
+ | </div> | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=thioredoxin reductase|thioredoxin-disulfide reductase}} | ||
+ | {{#set: ec-number=ec-1.8.1.9}} | ||
+ | {{#set: nb gene associated=13}} | ||
+ | {{#set: nb pathway associated=1}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}} |
Revision as of 20:47, 18 December 2020
Contents
Reaction THIOREDOXIN-REDUCT-NADPH-RXN
- direction:
- left-to-right
- common-name:
- thioredoxin-disulfide reductase
- thioredoxin reductase
- ec-number:
Reaction formula
- 1 NADPH[c] + 1 Ox-Thioredoxin[c] + 1 PROTON[c] => 1 NADP[c] + 1 Red-Thioredoxin[c]
Gene(s) associated with this reaction
- Gene: SJ16329
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ21344
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ00293
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ08960
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ00760
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ04991
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ00931
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ16658
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ06874
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ01778
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ09093
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ12278
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ21339
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- THIOREDOX-PWY, thioredoxin pathway:
- 1 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links