Difference between revisions of "SJ08583"

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(Created page with "Category:gene == Gene SJ06442 == * transcription-direction: ** positive * right-end-position: ** 187205 * left-end-position: ** 186762 * centisome-position: ** 39.276394...")
(Created page with "Category:gene == Gene SJ12523 == * transcription-direction: ** negative * right-end-position: ** 317108 * left-end-position: ** 305453 * centisome-position: ** 85.384315...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06442 ==
+
== Gene SJ12523 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 187205
+
** 317108
 
* left-end-position:
 
* left-end-position:
−
** 186762
+
** 305453
 
* centisome-position:
 
* centisome-position:
−
** 39.276394    
+
** 85.384315    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.1.1.135-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ADENPRIBOSYLTRAN-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[APPRT]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[GUANPRIBOSYLTRAN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CYTOCHROME-B5-REDUCTASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[HPRT]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[HYPOXANPRIBOSYLTRAN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[IRON--CYTOCHROME-C-REDUCTASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[NADPH--FERRIHEMOPROTEIN-REDUCTASE-RXN]]
+
* [[XPPRT]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[R621-RXN]]
+
</div>
−
** Category: [[annotation]]
+
== Pathway(s) associated ==
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[PWY-7807]]
−
* [[RXN-11195]]
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
** Category: [[annotation]]
+
* [[PWY-6610]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7805]]
−
{{#set: right-end-position=187205}}
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
{{#set: left-end-position=186762}}
+
* [[PWY-6605]]
−
{{#set: centisome-position=39.276394   }}
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[P121-PWY]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6599]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6620]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6609]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=317108}}
 +
{{#set: left-end-position=305453}}
 +
{{#set: centisome-position=85.384315   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=6}}
 
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=8}}

Revision as of 14:44, 5 January 2021

Gene SJ12523

  • transcription-direction:
    • negative
  • right-end-position:
    • 317108
  • left-end-position:
    • 305453
  • centisome-position:
    • 85.384315

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7807
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6610
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7805
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6605
    • 1 reactions found over 2 reactions in the full pathway
  • P121-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6599
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6620
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6609
    • 4 reactions found over 4 reactions in the full pathway




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