Difference between revisions of "SJ19006"
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(Created page with "Category:gene == Gene SJ07093 == * transcription-direction: ** positive * right-end-position: ** 25089 * left-end-position: ** 20112 * centisome-position: ** 28.271013...") |
(Created page with "Category:gene == Gene SJ18340 == * transcription-direction: ** negative * right-end-position: ** 152919 * left-end-position: ** 132502 * centisome-position: ** 53.309357...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ18340 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 152919 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 132502 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 53.309357 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[CHOLINE-KINASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | {{#set: transcription-direction= | + | ** Category: [[orthology]] |
− | {{#set: right-end-position= | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
− | {{#set: left-end-position= | + | * [[ETHANOLAMINE-KINASE-RXN]] |
− | {{#set: centisome-position= | + | ** Category: [[annotation]] |
− | {{#set: organism associated=S. | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | {{#set: nb reaction associated= | + | ** Category: [[orthology]] |
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | == Pathway(s) associated == | ||
+ | * [[PWY-7782]] | ||
+ | ** '''11''' reactions found over '''16''' reactions in the full pathway | ||
+ | * [[PWY3O-450]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-7818]] | ||
+ | ** '''2''' reactions found over '''19''' reactions in the full pathway | ||
+ | * [[PWY-7886]] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-3385]] | ||
+ | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY4FS-6]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: right-end-position=152919}} | ||
+ | {{#set: left-end-position=132502}} | ||
+ | {{#set: centisome-position=53.309357 }} | ||
+ | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
+ | {{#set: nb reaction associated=2}} | ||
+ | {{#set: nb pathway associated=6}} |
Revision as of 14:46, 5 January 2021
Contents
Gene SJ18340
- transcription-direction:
- negative
- right-end-position:
- 152919
- left-end-position:
- 132502
- centisome-position:
- 53.309357
Organism(s) associated with this gene
Reaction(s) associated
- CHOLINE-KINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- ETHANOLAMINE-KINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7782
- 11 reactions found over 16 reactions in the full pathway
- PWY3O-450
- 3 reactions found over 3 reactions in the full pathway
- PWY-7818
- 2 reactions found over 19 reactions in the full pathway
- PWY-7886
- 2 reactions found over 3 reactions in the full pathway
- PWY-3385
- 2 reactions found over 6 reactions in the full pathway
- PWY4FS-6
- 3 reactions found over 4 reactions in the full pathway