Difference between revisions of "SJ16361"

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(Created page with "Category:gene == Gene SJ02145 == * transcription-direction: ** negative * right-end-position: ** 109294 * left-end-position: ** 85384 * centisome-position: ** 60.56032...")
(Created page with "Category:gene == Gene SJ03727 == * transcription-direction: ** negative * right-end-position: ** 425673 * left-end-position: ** 392127 * centisome-position: ** 75.42426...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02145 ==
+
== Gene SJ03727 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 109294
+
** 425673
 
* left-end-position:
 
* left-end-position:
−
** 85384
+
** 392127
 
* centisome-position:
 
* centisome-position:
−
** 60.56032    
+
** 75.42426    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.4.1.151-RXN]]
+
* [[RXN-15561]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[2.4.1.67-RXN]]
+
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[2.4.1.82-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ALPHAGALACTOSID-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-11501]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12088]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7434]]
+
* [[PWY-7511]]
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5337]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6524]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6525]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY0-1301]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6527]]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=109294}}
+
{{#set: right-end-position=425673}}
−
{{#set: left-end-position=85384}}
+
{{#set: left-end-position=392127}}
−
{{#set: centisome-position=60.56032   }}
+
{{#set: centisome-position=75.42426   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=1}}

Revision as of 14:47, 5 January 2021

Gene SJ03727

  • transcription-direction:
    • negative
  • right-end-position:
    • 425673
  • left-end-position:
    • 392127
  • centisome-position:
    • 75.42426

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16361&oldid=55339"