Difference between revisions of "SJ02167"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ18617 == * transcription-direction: ** positive * right-end-position: ** 195285 * left-end-position: ** 191363 * centisome-position: ** 79.19441...")
(Created page with "Category:gene == Gene SJ20314 == * transcription-direction: ** negative * right-end-position: ** 552183 * left-end-position: ** 538085 * centisome-position: ** 86.68877...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18617 ==
+
== Gene SJ20314 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 195285
+
** 552183
 
* left-end-position:
 
* left-end-position:
−
** 191363
+
** 538085
 
* centisome-position:
 
* centisome-position:
−
** 79.19441    
+
** 86.68877    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.7.10.1-RXN]]
+
* [[2.4.1.123-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[GLYCOGENIN-GLUCOSYLTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROTEIN-KINASE-RXN]]
+
* [[PHENOL-BETA-GLUCOSYLTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
* [[RXN-7667]]
−
{{#set: right-end-position=195285}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=191363}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=79.19441   }}
+
== Pathway(s) associated ==
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[PWY-5337]]
−
{{#set: nb reaction associated=2}}
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6524]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6525]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5067]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=552183}}
 +
{{#set: left-end-position=538085}}
 +
{{#set: centisome-position=86.68877   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=4}}
 +
{{#set: nb pathway associated=4}}

Revision as of 14:47, 5 January 2021

Gene SJ20314

  • transcription-direction:
    • negative
  • right-end-position:
    • 552183
  • left-end-position:
    • 538085
  • centisome-position:
    • 86.68877

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5337
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6524
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6525
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5067
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02167&oldid=55494"