Difference between revisions of "SJ06650"

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(Created page with "Category:gene == Gene SJ15619 == * transcription-direction: ** negative * right-end-position: ** 163019 * left-end-position: ** 114589 * centisome-position: ** 39.046772...")
(Created page with "Category:gene == Gene SJ02238 == * transcription-direction: ** positive * right-end-position: ** 191118 * left-end-position: ** 161980 * centisome-position: ** 70.27606...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15619 ==
+
== Gene SJ02238 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 163019
+
** 191118
 
* left-end-position:
 
* left-end-position:
−
** 114589
+
** 161980
 
* centisome-position:
 
* centisome-position:
−
** 39.046772    
+
** 70.27606    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PROTEIN-KINASE-RXN]]
−
* [[3.1.26.3-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8443]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[ATPASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6545]]
+
* [[PWY-5381]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-7210]]
+
{{#set: transcription-direction=positive}}
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
{{#set: right-end-position=191118}}
−
* [[PWY-7198]]
+
{{#set: left-end-position=161980}}
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
{{#set: centisome-position=70.27606   }}
−
* [[PWY-7184]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
{{#set: nb reaction associated=2}}
−
{{#set: transcription-direction=negative}}
+
{{#set: nb pathway associated=1}}
−
{{#set: right-end-position=163019}}
 
−
{{#set: left-end-position=114589}}
 
−
{{#set: centisome-position=39.046772   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=6}}
 
−
{{#set: nb pathway associated=4}}
 

Revision as of 14:47, 5 January 2021

Gene SJ02238

  • transcription-direction:
    • positive
  • right-end-position:
    • 191118
  • left-end-position:
    • 161980
  • centisome-position:
    • 70.27606

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06650&oldid=55613"