Difference between revisions of "SJ02746"

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(Created page with "Category:gene == Gene SJ22398 == * transcription-direction: ** negative * right-end-position: ** 175362 * left-end-position: ** 158942 * centisome-position: ** 89.64934...")
(Created page with "Category:gene == Gene SJ06498 == * transcription-direction: ** positive * right-end-position: ** 31124 * left-end-position: ** 21980 * centisome-position: ** 27.97826...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ22398 ==
+
== Gene SJ06498 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 175362
+
** 31124
 
* left-end-position:
 
* left-end-position:
−
** 158942
+
** 21980
 
* centisome-position:
 
* centisome-position:
−
** 89.64934    
+
** 27.97826    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-969]]
−
* [[H2NEOPTERINALDOL-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[H2PTERIDINEPYROPHOSPHOKIN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[H2PTEROATESYNTH-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10857]]
+
* [[S-2-HYDROXY-ACID-OXIDASE-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15733]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6797]]
+
* [[PWY-181]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6148]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''14''' reactions in the full pathway
+
{{#set: right-end-position=31124}}
−
* [[PWY-6147]]
+
{{#set: left-end-position=21980}}
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=27.97826   }}
−
* [[PWY-7539]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
{{#set: nb reaction associated=2}}
−
* [[PWY-7853]]
+
{{#set: nb pathway associated=1}}
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7852]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6614]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=175362}}
 
−
{{#set: left-end-position=158942}}
 
−
{{#set: centisome-position=89.64934   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=5}}
 
−
{{#set: nb pathway associated=7}}
 

Revision as of 14:49, 5 January 2021

Gene SJ06498

  • transcription-direction:
    • positive
  • right-end-position:
    • 31124
  • left-end-position:
    • 21980
  • centisome-position:
    • 27.97826

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-181
    • 5 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02746&oldid=56267"