Difference between revisions of "SJ13727"
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(Created page with "Category:gene == Gene SJ13109 == * transcription-direction: ** positive * right-end-position: ** 271670 * left-end-position: ** 248710 * centisome-position: ** 71.95887...") |
(Created page with "Category:gene == Gene SJ07066 == * transcription-direction: ** positive * right-end-position: ** 180256 * left-end-position: ** 177130 * centisome-position: ** 38.146286...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ07066 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 180256 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 177130 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 38.146286 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[4-NITROPHENYLPHOSPHATASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[DOLICHYLDIPHOSPHATASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[PHOSPHATIDATE-PHOSPHATASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-16030]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-16121]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-17730]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[ | + | * [[TRIGLSYN-PWY]] |
− | ** ''' | + | ** '''5''' reactions found over '''7''' reactions in the full pathway |
+ | * [[PWY-6453]] | ||
+ | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7782]] | ||
+ | ** '''11''' reactions found over '''16''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=180256}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=177130}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=38.146286 }} |
− | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_carotenoid_curated}} |
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=6}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 14:49, 5 January 2021
Contents
Gene SJ07066
- transcription-direction:
- positive
- right-end-position:
- 180256
- left-end-position:
- 177130
- centisome-position:
- 38.146286
Organism(s) associated with this gene
Reaction(s) associated
- 4-NITROPHENYLPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- DOLICHYLDIPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: annotation
- PHOSPHATIDATE-PHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-16030
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-16121
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17730
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- TRIGLSYN-PWY
- 5 reactions found over 7 reactions in the full pathway
- PWY-6453
- 3 reactions found over 7 reactions in the full pathway
- PWY-7782
- 11 reactions found over 16 reactions in the full pathway