Difference between revisions of "SJ00056"

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(Created page with "Category:gene == Gene SJ07051 == * transcription-direction: ** positive * right-end-position: ** 48053 * left-end-position: ** 40644 * centisome-position: ** 56.974644...")
(Created page with "Category:gene == Gene SJ13100 == * transcription-direction: ** negative * right-end-position: ** 52787 * left-end-position: ** 50111 * centisome-position: ** 14.495266...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07051 ==
+
== Gene SJ13100 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 48053
+
** 52787
 
* left-end-position:
 
* left-end-position:
−
** 40644
+
** 50111
 
* centisome-position:
 
* centisome-position:
−
** 56.974644    
+
** 14.495266    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[DISULFOXRED-RXN]]
+
* [[RXN-12615]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7682]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-901]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[XANTHINE-OXIDASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-982]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-4621]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
* [[P164-PWY]]
−
* [[PWY-4202]]
+
** '''6''' reactions found over '''17''' reactions in the full pathway
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-6596]]
−
{{#set: transcription-direction=positive}}
+
** '''7''' reactions found over '''8''' reactions in the full pathway
−
{{#set: right-end-position=48053}}
+
* [[SALVADEHYPOX-PWY]]
−
{{#set: left-end-position=40644}}
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
{{#set: centisome-position=56.974644   }}
+
* [[PWY-5497]]
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
** '''10''' reactions found over '''24''' reactions in the full pathway
−
{{#set: nb reaction associated=2}}
+
* [[PWY-6606]]
−
{{#set: nb pathway associated=2}}
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6607]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6999]]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6608]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6538]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5695]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=52787}}
 +
{{#set: left-end-position=50111}}
 +
{{#set: centisome-position=14.495266   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=4}}
 +
{{#set: nb pathway associated=10}}

Revision as of 14:51, 5 January 2021

Gene SJ13100

  • transcription-direction:
    • negative
  • right-end-position:
    • 52787
  • left-end-position:
    • 50111
  • centisome-position:
    • 14.495266

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P164-PWY
    • 6 reactions found over 17 reactions in the full pathway
  • PWY-6596
    • 7 reactions found over 8 reactions in the full pathway
  • SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • PWY-6606
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6607
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6999
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-6608
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6538
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-5695
    • 4 reactions found over 4 reactions in the full pathway




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