Difference between revisions of "SJ06474"

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(Created page with "Category:gene == Gene SJ09995 == * transcription-direction: ** positive * right-end-position: ** 320512 * left-end-position: ** 313564 * centisome-position: ** 78.44709...")
(Created page with "Category:gene == Gene SJ20976 == * transcription-direction: ** positive * right-end-position: ** 75696 * left-end-position: ** 61598 * centisome-position: ** 30.591742...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09995 ==
+
== Gene SJ20976 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 320512
+
** 75696
 
* left-end-position:
 
* left-end-position:
−
** 313564
+
** 61598
 
* centisome-position:
 
* centisome-position:
−
** 78.44709    
+
** 30.591742    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[2.5.1.46-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-13414]]
+
* [[RXN-10949]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10952]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-13415]]
+
* [[RXN-10953]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10954]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7253]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-13416]]
+
* [[RXN0-5408]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-13417]]
+
* [[RXNQT-4142]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 40: Line 55:
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5905]]
+
* [[PWY-2301]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6363]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-4702]]
 +
** '''3''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-882]]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=320512}}
+
{{#set: right-end-position=75696}}
−
{{#set: left-end-position=313564}}
+
{{#set: left-end-position=61598}}
−
{{#set: centisome-position=78.44709   }}
+
{{#set: centisome-position=30.591742   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=9}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}

Revision as of 14:51, 5 January 2021

Gene SJ20976

  • transcription-direction:
    • positive
  • right-end-position:
    • 75696
  • left-end-position:
    • 61598
  • centisome-position:
    • 30.591742

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-2301
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6363
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-4702
    • 3 reactions found over 14 reactions in the full pathway
  • PWY-882
    • 6 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06474&oldid=57441"