Difference between revisions of "SJ00338"

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(Created page with "Category:gene == Gene SJ04031 == * transcription-direction: ** positive * right-end-position: ** 83520 * left-end-position: ** 79853 * centisome-position: ** 71.00190...")
(Created page with "Category:gene == Gene SJ03588 == * transcription-direction: ** negative * right-end-position: ** 42403 * left-end-position: ** 29045 * centisome-position: ** 24.511375...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04031 ==
+
== Gene SJ03588 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 83520
+
** 42403
 
* left-end-position:
 
* left-end-position:
−
** 79853
+
** 29045
 
* centisome-position:
 
* centisome-position:
−
** 71.00190    
+
** 24.511375    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[DISULFOXRED-RXN]]
+
* [[3.1.3.56-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15684]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[PHOSPHATIDYLINOSITOL-BISPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[THIOL-OXIDASE-RXN]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8730]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7533]]
+
* [[PWY-6363]]
−
** '''3''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-6368]]
−
{{#set: right-end-position=83520}}
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=79853}}
+
* [[PWY-6362]]
−
{{#set: centisome-position=71.00190   }}
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[PWY-6364]]
−
{{#set: nb reaction associated=3}}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
{{#set: nb pathway associated=1}}
+
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=42403}}
 +
{{#set: left-end-position=29045}}
 +
{{#set: centisome-position=24.511375   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=4}}
 +
{{#set: nb pathway associated=4}}

Revision as of 14:51, 5 January 2021

Gene SJ03588

  • transcription-direction:
    • negative
  • right-end-position:
    • 42403
  • left-end-position:
    • 29045
  • centisome-position:
    • 24.511375

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6363
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6368
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-6362
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6364
    • 2 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00338&oldid=57670"